Cargando…
Benchmarking DNA methylation analysis of 14 alignment algorithms for whole genome bisulfite sequencing in mammals
Whole genome bisulfite sequencing (WGBS) is an essential technique for methylome studies. Although a series of tools have been developed to overcome the mapping challenges caused by bisulfite treatment, the latest available tools have not been evaluated on the performance of reads mapping as well as...
Autores principales: | Gong, Wentao, Pan, Xiangchun, Xu, Dantong, Ji, Guanyu, Wang, Yifei, Tian, Yuhan, Cai, Jiali, Li, Jiaqi, Zhang, Zhe, Yuan, Xiaolong |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Research Network of Computational and Structural Biotechnology
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9465269/ https://www.ncbi.nlm.nih.gov/pubmed/36147684 http://dx.doi.org/10.1016/j.csbj.2022.08.051 |
Ejemplares similares
-
Expression Profile of Housekeeping Genes and Tissue-Specific Genes in Multiple Tissues of Pigs
por: Pan, Xiangchun, et al.
Publicado: (2022) -
Comprehensive benchmarking of software for mapping whole genome bisulfite data: from read alignment to DNA methylation analysis
por: Nunn, Adam, et al.
Publicado: (2021) -
Erratum to: Comprehensive benchmarking of software for mapping whole genome bisulfite data: from read alignment to DNA methylation analysis
por: Nunn, Adam, et al.
Publicado: (2021) -
An alignment algorithm for bisulfite sequencing using the Applied Biosystems SOLiD System
por: Ondov, Brian D., et al.
Publicado: (2010) -
Comparison and quantitative verification of mapping algorithms for whole-genome bisulfite sequencing
por: Kunde-Ramamoorthy, Govindarajan, et al.
Publicado: (2014)