Cargando…

Modern Solutions for Ancient Pathogens: Direct Pathogen Sequencing for Diagnosis of Lepromatous Leprosy and Cerebral Coenurosis

Microbes unculturable in vitro remain diagnostically challenging, dependent historically on clinical findings, histology, or targeted molecular detection. We applied whole-genome sequencing directly from tissue to diagnose infections with mycobacteria (leprosy) and parasites (coenurosis). Direct pat...

Descripción completa

Detalles Bibliográficos
Autores principales: Young, Bernadette C, Bush, Stephen J, Lipworth, Sam, George, Sophie, Dingle, Kate E, Sanderson, Nick, Brankin, Alice, Walker, Timothy, Sharma, Srilakshmi, Leong, James, Plaha, Puneet, Hofer, Monika, Chiodini, Peter, Gottstein, B, Furrer, Lavinia, Crook, Derrick, Brent, Andrew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9472670/
https://www.ncbi.nlm.nih.gov/pubmed/36119959
http://dx.doi.org/10.1093/ofid/ofac428
_version_ 1784789345870282752
author Young, Bernadette C
Bush, Stephen J
Lipworth, Sam
George, Sophie
Dingle, Kate E
Sanderson, Nick
Brankin, Alice
Walker, Timothy
Sharma, Srilakshmi
Leong, James
Plaha, Puneet
Hofer, Monika
Chiodini, Peter
Gottstein, B
Furrer, Lavinia
Crook, Derrick
Brent, Andrew
author_facet Young, Bernadette C
Bush, Stephen J
Lipworth, Sam
George, Sophie
Dingle, Kate E
Sanderson, Nick
Brankin, Alice
Walker, Timothy
Sharma, Srilakshmi
Leong, James
Plaha, Puneet
Hofer, Monika
Chiodini, Peter
Gottstein, B
Furrer, Lavinia
Crook, Derrick
Brent, Andrew
author_sort Young, Bernadette C
collection PubMed
description Microbes unculturable in vitro remain diagnostically challenging, dependent historically on clinical findings, histology, or targeted molecular detection. We applied whole-genome sequencing directly from tissue to diagnose infections with mycobacteria (leprosy) and parasites (coenurosis). Direct pathogen DNA sequencing provides flexible solutions to diagnosis of difficult pathogens in diverse contexts.
format Online
Article
Text
id pubmed-9472670
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-94726702022-09-15 Modern Solutions for Ancient Pathogens: Direct Pathogen Sequencing for Diagnosis of Lepromatous Leprosy and Cerebral Coenurosis Young, Bernadette C Bush, Stephen J Lipworth, Sam George, Sophie Dingle, Kate E Sanderson, Nick Brankin, Alice Walker, Timothy Sharma, Srilakshmi Leong, James Plaha, Puneet Hofer, Monika Chiodini, Peter Gottstein, B Furrer, Lavinia Crook, Derrick Brent, Andrew Open Forum Infect Dis Brief Report Microbes unculturable in vitro remain diagnostically challenging, dependent historically on clinical findings, histology, or targeted molecular detection. We applied whole-genome sequencing directly from tissue to diagnose infections with mycobacteria (leprosy) and parasites (coenurosis). Direct pathogen DNA sequencing provides flexible solutions to diagnosis of difficult pathogens in diverse contexts. Oxford University Press 2022-08-23 /pmc/articles/PMC9472670/ /pubmed/36119959 http://dx.doi.org/10.1093/ofid/ofac428 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (https://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Brief Report
Young, Bernadette C
Bush, Stephen J
Lipworth, Sam
George, Sophie
Dingle, Kate E
Sanderson, Nick
Brankin, Alice
Walker, Timothy
Sharma, Srilakshmi
Leong, James
Plaha, Puneet
Hofer, Monika
Chiodini, Peter
Gottstein, B
Furrer, Lavinia
Crook, Derrick
Brent, Andrew
Modern Solutions for Ancient Pathogens: Direct Pathogen Sequencing for Diagnosis of Lepromatous Leprosy and Cerebral Coenurosis
title Modern Solutions for Ancient Pathogens: Direct Pathogen Sequencing for Diagnosis of Lepromatous Leprosy and Cerebral Coenurosis
title_full Modern Solutions for Ancient Pathogens: Direct Pathogen Sequencing for Diagnosis of Lepromatous Leprosy and Cerebral Coenurosis
title_fullStr Modern Solutions for Ancient Pathogens: Direct Pathogen Sequencing for Diagnosis of Lepromatous Leprosy and Cerebral Coenurosis
title_full_unstemmed Modern Solutions for Ancient Pathogens: Direct Pathogen Sequencing for Diagnosis of Lepromatous Leprosy and Cerebral Coenurosis
title_short Modern Solutions for Ancient Pathogens: Direct Pathogen Sequencing for Diagnosis of Lepromatous Leprosy and Cerebral Coenurosis
title_sort modern solutions for ancient pathogens: direct pathogen sequencing for diagnosis of lepromatous leprosy and cerebral coenurosis
topic Brief Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9472670/
https://www.ncbi.nlm.nih.gov/pubmed/36119959
http://dx.doi.org/10.1093/ofid/ofac428
work_keys_str_mv AT youngbernadettec modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT bushstephenj modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT lipworthsam modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT georgesophie modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT dinglekatee modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT sandersonnick modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT brankinalice modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT walkertimothy modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT sharmasrilakshmi modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT leongjames modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT plahapuneet modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT hofermonika modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT chiodinipeter modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT gottsteinb modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT furrerlavinia modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT crookderrick modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis
AT brentandrew modernsolutionsforancientpathogensdirectpathogensequencingfordiagnosisoflepromatousleprosyandcerebralcoenurosis