Cargando…

NMR study of human macroPARPs domains: (1)H, (15)N and (13)C resonance assignment of hPARP14 macro domain 2 in the free and the ADPr bound state

hPARP14 is a human ADP-ribosyl-transferase (ART) that belongs to the macroPARPs family, together with hPARP9 and hPARP15. It contains a tandem of three macro domains (MD) while each of them has different properties. The first one, namely MD1, has not been reported to exhibit a high binding affinity...

Descripción completa

Detalles Bibliográficos
Autores principales: Fourkiotis, Nikolaos K., Charalampous, Periklis, Tsika, Aikaterini C., Kravvariti, Konstantina P., Sideras-Bisdekis, Christos, Gallo, Angelo, Spyroulias, Georgios A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9477163/
https://www.ncbi.nlm.nih.gov/pubmed/36107366
http://dx.doi.org/10.1007/s12104-022-10110-6
_version_ 1784790297527451648
author Fourkiotis, Nikolaos K.
Charalampous, Periklis
Tsika, Aikaterini C.
Kravvariti, Konstantina P.
Sideras-Bisdekis, Christos
Gallo, Angelo
Spyroulias, Georgios A.
author_facet Fourkiotis, Nikolaos K.
Charalampous, Periklis
Tsika, Aikaterini C.
Kravvariti, Konstantina P.
Sideras-Bisdekis, Christos
Gallo, Angelo
Spyroulias, Georgios A.
author_sort Fourkiotis, Nikolaos K.
collection PubMed
description hPARP14 is a human ADP-ribosyl-transferase (ART) that belongs to the macroPARPs family, together with hPARP9 and hPARP15. It contains a tandem of three macro domains (MD) while each of them has different properties. The first one, namely MD1, has not been reported to exhibit a high binding affinity for ADP-ribose (ADPr) in contrast to the following two (MD2 and MD3). All three MDs exhibit an α/β/α sandwich-like fold as reported by the deposited crystallographic structures. MD2 and MD3 recognize mono-ADP-ribosylated (MARylated) but not poly-ADP-ribosylated (PARylated) substrates and thus they allow hPARP14 to bind its targets, which can be potentially MARylated by its catalytic domain (CD). hPARP14 participates in DNA damage repair process and immune response against viruses like SARS-CoV-2, which also harbors an MD fold. Furthermore, hPARP14 like the other two macroPARPs (hPARP9 and hPARP15), is implicated in numerous types of cancer, such as B-aggressive lymphoma and sarcoma, rendering its MDs as potential important drug targets. Herein, we report the complete NMR backbone and side chain assignment ((1)H, (13)C, (15)N) of hPARP14 MD2 in the free and ADPr bound states and the NMR chemical shift-based prediction of its secondary structure elements. This is the first reported NMR study of a hPARP macro domain, paving the way to screen by NMR chemical compounds which may alter the ability of hPARP14 to interact with its substrates affecting its function.
format Online
Article
Text
id pubmed-9477163
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Springer Netherlands
record_format MEDLINE/PubMed
spelling pubmed-94771632022-09-16 NMR study of human macroPARPs domains: (1)H, (15)N and (13)C resonance assignment of hPARP14 macro domain 2 in the free and the ADPr bound state Fourkiotis, Nikolaos K. Charalampous, Periklis Tsika, Aikaterini C. Kravvariti, Konstantina P. Sideras-Bisdekis, Christos Gallo, Angelo Spyroulias, Georgios A. Biomol NMR Assign Article hPARP14 is a human ADP-ribosyl-transferase (ART) that belongs to the macroPARPs family, together with hPARP9 and hPARP15. It contains a tandem of three macro domains (MD) while each of them has different properties. The first one, namely MD1, has not been reported to exhibit a high binding affinity for ADP-ribose (ADPr) in contrast to the following two (MD2 and MD3). All three MDs exhibit an α/β/α sandwich-like fold as reported by the deposited crystallographic structures. MD2 and MD3 recognize mono-ADP-ribosylated (MARylated) but not poly-ADP-ribosylated (PARylated) substrates and thus they allow hPARP14 to bind its targets, which can be potentially MARylated by its catalytic domain (CD). hPARP14 participates in DNA damage repair process and immune response against viruses like SARS-CoV-2, which also harbors an MD fold. Furthermore, hPARP14 like the other two macroPARPs (hPARP9 and hPARP15), is implicated in numerous types of cancer, such as B-aggressive lymphoma and sarcoma, rendering its MDs as potential important drug targets. Herein, we report the complete NMR backbone and side chain assignment ((1)H, (13)C, (15)N) of hPARP14 MD2 in the free and ADPr bound states and the NMR chemical shift-based prediction of its secondary structure elements. This is the first reported NMR study of a hPARP macro domain, paving the way to screen by NMR chemical compounds which may alter the ability of hPARP14 to interact with its substrates affecting its function. Springer Netherlands 2022-09-15 2022 /pmc/articles/PMC9477163/ /pubmed/36107366 http://dx.doi.org/10.1007/s12104-022-10110-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Fourkiotis, Nikolaos K.
Charalampous, Periklis
Tsika, Aikaterini C.
Kravvariti, Konstantina P.
Sideras-Bisdekis, Christos
Gallo, Angelo
Spyroulias, Georgios A.
NMR study of human macroPARPs domains: (1)H, (15)N and (13)C resonance assignment of hPARP14 macro domain 2 in the free and the ADPr bound state
title NMR study of human macroPARPs domains: (1)H, (15)N and (13)C resonance assignment of hPARP14 macro domain 2 in the free and the ADPr bound state
title_full NMR study of human macroPARPs domains: (1)H, (15)N and (13)C resonance assignment of hPARP14 macro domain 2 in the free and the ADPr bound state
title_fullStr NMR study of human macroPARPs domains: (1)H, (15)N and (13)C resonance assignment of hPARP14 macro domain 2 in the free and the ADPr bound state
title_full_unstemmed NMR study of human macroPARPs domains: (1)H, (15)N and (13)C resonance assignment of hPARP14 macro domain 2 in the free and the ADPr bound state
title_short NMR study of human macroPARPs domains: (1)H, (15)N and (13)C resonance assignment of hPARP14 macro domain 2 in the free and the ADPr bound state
title_sort nmr study of human macroparps domains: (1)h, (15)n and (13)c resonance assignment of hparp14 macro domain 2 in the free and the adpr bound state
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9477163/
https://www.ncbi.nlm.nih.gov/pubmed/36107366
http://dx.doi.org/10.1007/s12104-022-10110-6
work_keys_str_mv AT fourkiotisnikolaosk nmrstudyofhumanmacroparpsdomains1h15nand13cresonanceassignmentofhparp14macrodomain2inthefreeandtheadprboundstate
AT charalampousperiklis nmrstudyofhumanmacroparpsdomains1h15nand13cresonanceassignmentofhparp14macrodomain2inthefreeandtheadprboundstate
AT tsikaaikaterinic nmrstudyofhumanmacroparpsdomains1h15nand13cresonanceassignmentofhparp14macrodomain2inthefreeandtheadprboundstate
AT kravvaritikonstantinap nmrstudyofhumanmacroparpsdomains1h15nand13cresonanceassignmentofhparp14macrodomain2inthefreeandtheadprboundstate
AT siderasbisdekischristos nmrstudyofhumanmacroparpsdomains1h15nand13cresonanceassignmentofhparp14macrodomain2inthefreeandtheadprboundstate
AT galloangelo nmrstudyofhumanmacroparpsdomains1h15nand13cresonanceassignmentofhparp14macrodomain2inthefreeandtheadprboundstate
AT spyrouliasgeorgiosa nmrstudyofhumanmacroparpsdomains1h15nand13cresonanceassignmentofhparp14macrodomain2inthefreeandtheadprboundstate