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Bathometer: lightning fast depth-of-reads query

MOTIVATION: The query for the number of reads overlapping a given region is a common step in the analysis of Illumina sequencing data. Sometimes, these queries are not conveniently precomputable. It seems beneficial to make this kind of arbitrary query as fast and convenient as possible. RESULTS: We...

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Detalles Bibliográficos
Autores principales: Stenzel, U, Horn, S
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9502157/
https://www.ncbi.nlm.nih.gov/pubmed/33983362
http://dx.doi.org/10.1093/bioinformatics/btab372