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Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules

The G protein-coupled receptor 84 (GPR84) is found in immune cells and its expression is increased under inflammatory conditions. Activation of GPR84 by medium-chain fatty acids results in pro-inflammatory responses. Here, we screened available vertebrate genome data and found that GPR84 is present...

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Autores principales: Schulze, Amadeus Samuel, Kleinau, Gunnar, Krakowsky, Rosanna, Rochmann, David, Das, Ranajit, Worth, Catherine L., Krumbholz, Petra, Scheerer, Patrick, Stäubert, Claudia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9508565/
https://www.ncbi.nlm.nih.gov/pubmed/36164652
http://dx.doi.org/10.1016/j.isci.2022.105087
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author Schulze, Amadeus Samuel
Kleinau, Gunnar
Krakowsky, Rosanna
Rochmann, David
Das, Ranajit
Worth, Catherine L.
Krumbholz, Petra
Scheerer, Patrick
Stäubert, Claudia
author_facet Schulze, Amadeus Samuel
Kleinau, Gunnar
Krakowsky, Rosanna
Rochmann, David
Das, Ranajit
Worth, Catherine L.
Krumbholz, Petra
Scheerer, Patrick
Stäubert, Claudia
author_sort Schulze, Amadeus Samuel
collection PubMed
description The G protein-coupled receptor 84 (GPR84) is found in immune cells and its expression is increased under inflammatory conditions. Activation of GPR84 by medium-chain fatty acids results in pro-inflammatory responses. Here, we screened available vertebrate genome data and found that GPR84 is present in vertebrates for more than 500 million years but absent in birds and a pseudogene in bats. Cloning and functional characterization of several mammalian GPR84 orthologs in combination with evolutionary and model-based structural analyses revealed evidence for positive selection of bear GPR84 orthologs. Naturally occurring human GPR84 variants are most frequent in Asian populations causing a loss of function. Further, we identified cis- and trans-2-decenoic acid, both known to mediate bacterial communication, as evolutionary highly conserved ligands. Our integrated set of approaches contributes to a comprehensive understanding of GPR84 in terms of evolutionary and structural aspects, highlighting GPR84 as a conserved immune cell receptor for bacteria-derived molecules.
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spelling pubmed-95085652022-09-25 Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules Schulze, Amadeus Samuel Kleinau, Gunnar Krakowsky, Rosanna Rochmann, David Das, Ranajit Worth, Catherine L. Krumbholz, Petra Scheerer, Patrick Stäubert, Claudia iScience Article The G protein-coupled receptor 84 (GPR84) is found in immune cells and its expression is increased under inflammatory conditions. Activation of GPR84 by medium-chain fatty acids results in pro-inflammatory responses. Here, we screened available vertebrate genome data and found that GPR84 is present in vertebrates for more than 500 million years but absent in birds and a pseudogene in bats. Cloning and functional characterization of several mammalian GPR84 orthologs in combination with evolutionary and model-based structural analyses revealed evidence for positive selection of bear GPR84 orthologs. Naturally occurring human GPR84 variants are most frequent in Asian populations causing a loss of function. Further, we identified cis- and trans-2-decenoic acid, both known to mediate bacterial communication, as evolutionary highly conserved ligands. Our integrated set of approaches contributes to a comprehensive understanding of GPR84 in terms of evolutionary and structural aspects, highlighting GPR84 as a conserved immune cell receptor for bacteria-derived molecules. Elsevier 2022-09-06 /pmc/articles/PMC9508565/ /pubmed/36164652 http://dx.doi.org/10.1016/j.isci.2022.105087 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Schulze, Amadeus Samuel
Kleinau, Gunnar
Krakowsky, Rosanna
Rochmann, David
Das, Ranajit
Worth, Catherine L.
Krumbholz, Petra
Scheerer, Patrick
Stäubert, Claudia
Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules
title Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules
title_full Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules
title_fullStr Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules
title_full_unstemmed Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules
title_short Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules
title_sort evolutionary analyses reveal immune cell receptor gpr84 as a conserved receptor for bacteria-derived molecules
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9508565/
https://www.ncbi.nlm.nih.gov/pubmed/36164652
http://dx.doi.org/10.1016/j.isci.2022.105087
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