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Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules
The G protein-coupled receptor 84 (GPR84) is found in immune cells and its expression is increased under inflammatory conditions. Activation of GPR84 by medium-chain fatty acids results in pro-inflammatory responses. Here, we screened available vertebrate genome data and found that GPR84 is present...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9508565/ https://www.ncbi.nlm.nih.gov/pubmed/36164652 http://dx.doi.org/10.1016/j.isci.2022.105087 |
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author | Schulze, Amadeus Samuel Kleinau, Gunnar Krakowsky, Rosanna Rochmann, David Das, Ranajit Worth, Catherine L. Krumbholz, Petra Scheerer, Patrick Stäubert, Claudia |
author_facet | Schulze, Amadeus Samuel Kleinau, Gunnar Krakowsky, Rosanna Rochmann, David Das, Ranajit Worth, Catherine L. Krumbholz, Petra Scheerer, Patrick Stäubert, Claudia |
author_sort | Schulze, Amadeus Samuel |
collection | PubMed |
description | The G protein-coupled receptor 84 (GPR84) is found in immune cells and its expression is increased under inflammatory conditions. Activation of GPR84 by medium-chain fatty acids results in pro-inflammatory responses. Here, we screened available vertebrate genome data and found that GPR84 is present in vertebrates for more than 500 million years but absent in birds and a pseudogene in bats. Cloning and functional characterization of several mammalian GPR84 orthologs in combination with evolutionary and model-based structural analyses revealed evidence for positive selection of bear GPR84 orthologs. Naturally occurring human GPR84 variants are most frequent in Asian populations causing a loss of function. Further, we identified cis- and trans-2-decenoic acid, both known to mediate bacterial communication, as evolutionary highly conserved ligands. Our integrated set of approaches contributes to a comprehensive understanding of GPR84 in terms of evolutionary and structural aspects, highlighting GPR84 as a conserved immune cell receptor for bacteria-derived molecules. |
format | Online Article Text |
id | pubmed-9508565 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-95085652022-09-25 Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules Schulze, Amadeus Samuel Kleinau, Gunnar Krakowsky, Rosanna Rochmann, David Das, Ranajit Worth, Catherine L. Krumbholz, Petra Scheerer, Patrick Stäubert, Claudia iScience Article The G protein-coupled receptor 84 (GPR84) is found in immune cells and its expression is increased under inflammatory conditions. Activation of GPR84 by medium-chain fatty acids results in pro-inflammatory responses. Here, we screened available vertebrate genome data and found that GPR84 is present in vertebrates for more than 500 million years but absent in birds and a pseudogene in bats. Cloning and functional characterization of several mammalian GPR84 orthologs in combination with evolutionary and model-based structural analyses revealed evidence for positive selection of bear GPR84 orthologs. Naturally occurring human GPR84 variants are most frequent in Asian populations causing a loss of function. Further, we identified cis- and trans-2-decenoic acid, both known to mediate bacterial communication, as evolutionary highly conserved ligands. Our integrated set of approaches contributes to a comprehensive understanding of GPR84 in terms of evolutionary and structural aspects, highlighting GPR84 as a conserved immune cell receptor for bacteria-derived molecules. Elsevier 2022-09-06 /pmc/articles/PMC9508565/ /pubmed/36164652 http://dx.doi.org/10.1016/j.isci.2022.105087 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Schulze, Amadeus Samuel Kleinau, Gunnar Krakowsky, Rosanna Rochmann, David Das, Ranajit Worth, Catherine L. Krumbholz, Petra Scheerer, Patrick Stäubert, Claudia Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules |
title | Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules |
title_full | Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules |
title_fullStr | Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules |
title_full_unstemmed | Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules |
title_short | Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived molecules |
title_sort | evolutionary analyses reveal immune cell receptor gpr84 as a conserved receptor for bacteria-derived molecules |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9508565/ https://www.ncbi.nlm.nih.gov/pubmed/36164652 http://dx.doi.org/10.1016/j.isci.2022.105087 |
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