MMGraph: a multiple motif predictor based on graph neural network and coexisting probability for ATAC-seq data

MOTIVATION: Transcription factor binding sites (TFBSs) prediction is a crucial step in revealing functions of transcription factors from high-throughput sequencing data. Assay for Transposase-Accessible Chromatin using sequencing (ATAC-seq) provides insight on TFBSs and nucleosome positioning by pro...

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Detalles Bibliográficos
Autores principales: Zhang, Shuangquan, Yang, Lili, Wu, Xiaotian, Sheng, Nan, Fu, Yuan, Ma, Anjun, Wang, Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9524997/
https://www.ncbi.nlm.nih.gov/pubmed/35997564
http://dx.doi.org/10.1093/bioinformatics/btac572

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9524997/
https://www.ncbi.nlm.nih.gov/pubmed/35997564
http://dx.doi.org/10.1093/bioinformatics/btac572

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