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Dehydrogenation versus deprotonation of disaccharide molecules in vacuum: a thorough theoretical investigation

Dehydrogenation and deprotonation of sucrose and trehalose molecules in vacuum is theoretically studied by using ab initio calculations in the framework of the density functional theory. The differences in the structural, electronic, energetic and vibrational properties of dehydrogenated and deproto...

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Autores principales: Andriyevsky, Bohdan, Tarrat, Nathalie, Cortés, Juan, Schön, Johann Christian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9554720/
https://www.ncbi.nlm.nih.gov/pubmed/36249331
http://dx.doi.org/10.1098/rsos.220436
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author Andriyevsky, Bohdan
Tarrat, Nathalie
Cortés, Juan
Schön, Johann Christian
author_facet Andriyevsky, Bohdan
Tarrat, Nathalie
Cortés, Juan
Schön, Johann Christian
author_sort Andriyevsky, Bohdan
collection PubMed
description Dehydrogenation and deprotonation of sucrose and trehalose molecules in vacuum is theoretically studied by using ab initio calculations in the framework of the density functional theory. The differences in the structural, electronic, energetic and vibrational properties of dehydrogenated and deprotonated molecules are discussed, depending on the site from which the hydrogen atom or the proton has been removed. The dehydrogenated molecules are found to be stable, regardless of which hydrogen atom is removed. This contrasts with the instability of the deprotonated molecules, where break-ups or structural reorganizations of the molecule are observed in 20–30% of the cases, but only when the hydrogen atom whose proton is removed was bonded to a carbon atom. Considering the stability and possible rearrangements of the hydrogen network of the deprotonated/dehydrogenated molecule, the formation of additional hydrogen-bridge bonds compared with the nominal molecule appears to be more pronounced for the deprotonated molecules than for the dehydrogenated ones. Moreover, our calculations show that the hydrogen-transfer energy barriers are usually larger for the deprotonated molecules than for the dehydrogenated ones. Finally, compared with the nominal molecule, the vibrational frequency spectrum is shifted to lower frequencies for both the dehydrogenated and the deprotonated molecules.
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spelling pubmed-95547202022-10-15 Dehydrogenation versus deprotonation of disaccharide molecules in vacuum: a thorough theoretical investigation Andriyevsky, Bohdan Tarrat, Nathalie Cortés, Juan Schön, Johann Christian R Soc Open Sci Chemistry Dehydrogenation and deprotonation of sucrose and trehalose molecules in vacuum is theoretically studied by using ab initio calculations in the framework of the density functional theory. The differences in the structural, electronic, energetic and vibrational properties of dehydrogenated and deprotonated molecules are discussed, depending on the site from which the hydrogen atom or the proton has been removed. The dehydrogenated molecules are found to be stable, regardless of which hydrogen atom is removed. This contrasts with the instability of the deprotonated molecules, where break-ups or structural reorganizations of the molecule are observed in 20–30% of the cases, but only when the hydrogen atom whose proton is removed was bonded to a carbon atom. Considering the stability and possible rearrangements of the hydrogen network of the deprotonated/dehydrogenated molecule, the formation of additional hydrogen-bridge bonds compared with the nominal molecule appears to be more pronounced for the deprotonated molecules than for the dehydrogenated ones. Moreover, our calculations show that the hydrogen-transfer energy barriers are usually larger for the deprotonated molecules than for the dehydrogenated ones. Finally, compared with the nominal molecule, the vibrational frequency spectrum is shifted to lower frequencies for both the dehydrogenated and the deprotonated molecules. The Royal Society 2022-10-12 /pmc/articles/PMC9554720/ /pubmed/36249331 http://dx.doi.org/10.1098/rsos.220436 Text en © 2022 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited.
spellingShingle Chemistry
Andriyevsky, Bohdan
Tarrat, Nathalie
Cortés, Juan
Schön, Johann Christian
Dehydrogenation versus deprotonation of disaccharide molecules in vacuum: a thorough theoretical investigation
title Dehydrogenation versus deprotonation of disaccharide molecules in vacuum: a thorough theoretical investigation
title_full Dehydrogenation versus deprotonation of disaccharide molecules in vacuum: a thorough theoretical investigation
title_fullStr Dehydrogenation versus deprotonation of disaccharide molecules in vacuum: a thorough theoretical investigation
title_full_unstemmed Dehydrogenation versus deprotonation of disaccharide molecules in vacuum: a thorough theoretical investigation
title_short Dehydrogenation versus deprotonation of disaccharide molecules in vacuum: a thorough theoretical investigation
title_sort dehydrogenation versus deprotonation of disaccharide molecules in vacuum: a thorough theoretical investigation
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9554720/
https://www.ncbi.nlm.nih.gov/pubmed/36249331
http://dx.doi.org/10.1098/rsos.220436
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