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Intrinsically disordered regions of tristetraprolin and DCP2 directly interact to mediate decay of ARE-mRNA

The RNA-binding protein tristetraprolin (TTP) is a potent activator of mRNA decay, specifically for transcripts bearing AU-rich elements (AREs) in their 3′-untranslated regions. TTP functions as a mediator for mRNA decay by interacting with the decay machinery and recruiting it to the target ARE-mRN...

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Autores principales: Maciej, Vincent D, Mateva, Nevena, Schwarz, Juliane, Dittmers, Theresa, Mallick, Megha, Urlaub, Henning, Chakrabarti, Sutapa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9561381/
https://www.ncbi.nlm.nih.gov/pubmed/36130271
http://dx.doi.org/10.1093/nar/gkac797
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author Maciej, Vincent D
Mateva, Nevena
Schwarz, Juliane
Dittmers, Theresa
Mallick, Megha
Urlaub, Henning
Chakrabarti, Sutapa
author_facet Maciej, Vincent D
Mateva, Nevena
Schwarz, Juliane
Dittmers, Theresa
Mallick, Megha
Urlaub, Henning
Chakrabarti, Sutapa
author_sort Maciej, Vincent D
collection PubMed
description The RNA-binding protein tristetraprolin (TTP) is a potent activator of mRNA decay, specifically for transcripts bearing AU-rich elements (AREs) in their 3′-untranslated regions. TTP functions as a mediator for mRNA decay by interacting with the decay machinery and recruiting it to the target ARE-mRNA. In this study, we report a weak, but direct interaction between TTP and the human decapping enzyme DCP2, which impacts the stability of ARE transcripts. The TTP–DCP2 interaction is unusual as it involves intrinsically disordered regions (IDRs) of both binding partners. We show that the IDR of DCP2 has a propensity for oligomerization and liquid–liquid phase separation in vitro. Binding of TTP to DCP2 leads to its partitioning into phase-separated droplets formed by DCP2, suggesting that molecular crowding might facilitate the weak interaction between the two proteins and enable assembly of a decapping-competent mRNA–protein complex on TTP-bound transcripts in cells. Our studies underline the role of weak interactions in the cellular interaction network and their contribution towards cellular functionality.
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spelling pubmed-95613812022-10-18 Intrinsically disordered regions of tristetraprolin and DCP2 directly interact to mediate decay of ARE-mRNA Maciej, Vincent D Mateva, Nevena Schwarz, Juliane Dittmers, Theresa Mallick, Megha Urlaub, Henning Chakrabarti, Sutapa Nucleic Acids Res RNA and RNA-protein complexes The RNA-binding protein tristetraprolin (TTP) is a potent activator of mRNA decay, specifically for transcripts bearing AU-rich elements (AREs) in their 3′-untranslated regions. TTP functions as a mediator for mRNA decay by interacting with the decay machinery and recruiting it to the target ARE-mRNA. In this study, we report a weak, but direct interaction between TTP and the human decapping enzyme DCP2, which impacts the stability of ARE transcripts. The TTP–DCP2 interaction is unusual as it involves intrinsically disordered regions (IDRs) of both binding partners. We show that the IDR of DCP2 has a propensity for oligomerization and liquid–liquid phase separation in vitro. Binding of TTP to DCP2 leads to its partitioning into phase-separated droplets formed by DCP2, suggesting that molecular crowding might facilitate the weak interaction between the two proteins and enable assembly of a decapping-competent mRNA–protein complex on TTP-bound transcripts in cells. Our studies underline the role of weak interactions in the cellular interaction network and their contribution towards cellular functionality. Oxford University Press 2022-09-21 /pmc/articles/PMC9561381/ /pubmed/36130271 http://dx.doi.org/10.1093/nar/gkac797 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle RNA and RNA-protein complexes
Maciej, Vincent D
Mateva, Nevena
Schwarz, Juliane
Dittmers, Theresa
Mallick, Megha
Urlaub, Henning
Chakrabarti, Sutapa
Intrinsically disordered regions of tristetraprolin and DCP2 directly interact to mediate decay of ARE-mRNA
title Intrinsically disordered regions of tristetraprolin and DCP2 directly interact to mediate decay of ARE-mRNA
title_full Intrinsically disordered regions of tristetraprolin and DCP2 directly interact to mediate decay of ARE-mRNA
title_fullStr Intrinsically disordered regions of tristetraprolin and DCP2 directly interact to mediate decay of ARE-mRNA
title_full_unstemmed Intrinsically disordered regions of tristetraprolin and DCP2 directly interact to mediate decay of ARE-mRNA
title_short Intrinsically disordered regions of tristetraprolin and DCP2 directly interact to mediate decay of ARE-mRNA
title_sort intrinsically disordered regions of tristetraprolin and dcp2 directly interact to mediate decay of are-mrna
topic RNA and RNA-protein complexes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9561381/
https://www.ncbi.nlm.nih.gov/pubmed/36130271
http://dx.doi.org/10.1093/nar/gkac797
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