Taxonomy Informed Clustering, an Optimized Method for Purer and More Informative Clusters in Diversity Analysis and Microbiome Profiling

Bacterial diversity is often analyzed using 16S rRNA gene amplicon sequencing. Commonly, sequences are clustered based on similarity cutoffs to obtain groups reflecting molecular species, genera, or families. Due to the amount of the generated sequencing data, greedy algorithms are preferred for the...

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Detalles Bibliográficos
Autores principales: Kioukis, Antonios, Pourjam, Mohsen, Neuhaus, Klaus, Lagkouvardos, Ilias
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Bioinformatics
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9580952/
https://www.ncbi.nlm.nih.gov/pubmed/36304326
http://dx.doi.org/10.3389/fbinf.2022.864597

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9580952/
https://www.ncbi.nlm.nih.gov/pubmed/36304326
http://dx.doi.org/10.3389/fbinf.2022.864597

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