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IQGAP3 in clear cell renal cell carcinoma contributes to drug resistance and genome stability

BACKGROUND: Clear cell renal clear cell carcinoma (ccRCC) is resistant to most chemotherapeutic drugs and the molecular mechanisms have not been fully revealed. Genomic instability and the abnormal activation of bypass DNA repair pathway is the potential cause of tumor resistance to radiotherapy and...

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Autores principales: Li, Wen, Wang, Zhifeng, Wang, Hanlin, Zhang, Jian, Wang, Xiaobin, Xing, Shaojun, Chen, Si
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9586079/
https://www.ncbi.nlm.nih.gov/pubmed/36275458
http://dx.doi.org/10.7717/peerj.14201
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author Li, Wen
Wang, Zhifeng
Wang, Hanlin
Zhang, Jian
Wang, Xiaobin
Xing, Shaojun
Chen, Si
author_facet Li, Wen
Wang, Zhifeng
Wang, Hanlin
Zhang, Jian
Wang, Xiaobin
Xing, Shaojun
Chen, Si
author_sort Li, Wen
collection PubMed
description BACKGROUND: Clear cell renal clear cell carcinoma (ccRCC) is resistant to most chemotherapeutic drugs and the molecular mechanisms have not been fully revealed. Genomic instability and the abnormal activation of bypass DNA repair pathway is the potential cause of tumor resistance to radiotherapy and chemotherapy. IQ-motif GTPase activating protein 3 (IQGAP3) regulates cell migration and intercellular adhesion. This study aims to analysis the effects of IQGAP3 expression on cell survival, genome stability and clinical prognosis in ccRCC. METHODS: Multiple bioinformatics analysis based on TCGA database and IHC analysis on clinical specimens were included. Quantitative real-time polymerase chain reaction (qRT-PCR) and western blot (WB) were used to determine protein expression level. MTT assay and 3D spheroid cell growth assay were used to assess cell proliferation and drug resistance in RNAi transfected ccRCC cells. Cell invasion capacity was evaluated by transwell assay. The influence of IQGAP3 on genome instability was revealed by micronuclei number and γ H2AX recruitment test. RESULTS: The highly expressed IQGAP3 in multiple subtypes of renal cell carcinoma has a clear prognostic value. Deletion of IQGAP3 inhibits cell growth in 3D Matrigel. IQGAP3 depletion lso increases accumulated DNA damage, and improves cell sensitivity to ionizing radiation and chemotherapeutic drugs. Therefore, targeting DNA damage repair function of IQGAP3 in tumorigenesis can provide ideas for the development of new targets for early diagnosis.
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spelling pubmed-95860792022-10-22 IQGAP3 in clear cell renal cell carcinoma contributes to drug resistance and genome stability Li, Wen Wang, Zhifeng Wang, Hanlin Zhang, Jian Wang, Xiaobin Xing, Shaojun Chen, Si PeerJ Bioinformatics BACKGROUND: Clear cell renal clear cell carcinoma (ccRCC) is resistant to most chemotherapeutic drugs and the molecular mechanisms have not been fully revealed. Genomic instability and the abnormal activation of bypass DNA repair pathway is the potential cause of tumor resistance to radiotherapy and chemotherapy. IQ-motif GTPase activating protein 3 (IQGAP3) regulates cell migration and intercellular adhesion. This study aims to analysis the effects of IQGAP3 expression on cell survival, genome stability and clinical prognosis in ccRCC. METHODS: Multiple bioinformatics analysis based on TCGA database and IHC analysis on clinical specimens were included. Quantitative real-time polymerase chain reaction (qRT-PCR) and western blot (WB) were used to determine protein expression level. MTT assay and 3D spheroid cell growth assay were used to assess cell proliferation and drug resistance in RNAi transfected ccRCC cells. Cell invasion capacity was evaluated by transwell assay. The influence of IQGAP3 on genome instability was revealed by micronuclei number and γ H2AX recruitment test. RESULTS: The highly expressed IQGAP3 in multiple subtypes of renal cell carcinoma has a clear prognostic value. Deletion of IQGAP3 inhibits cell growth in 3D Matrigel. IQGAP3 depletion lso increases accumulated DNA damage, and improves cell sensitivity to ionizing radiation and chemotherapeutic drugs. Therefore, targeting DNA damage repair function of IQGAP3 in tumorigenesis can provide ideas for the development of new targets for early diagnosis. PeerJ Inc. 2022-10-18 /pmc/articles/PMC9586079/ /pubmed/36275458 http://dx.doi.org/10.7717/peerj.14201 Text en ©2022 Li et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Li, Wen
Wang, Zhifeng
Wang, Hanlin
Zhang, Jian
Wang, Xiaobin
Xing, Shaojun
Chen, Si
IQGAP3 in clear cell renal cell carcinoma contributes to drug resistance and genome stability
title IQGAP3 in clear cell renal cell carcinoma contributes to drug resistance and genome stability
title_full IQGAP3 in clear cell renal cell carcinoma contributes to drug resistance and genome stability
title_fullStr IQGAP3 in clear cell renal cell carcinoma contributes to drug resistance and genome stability
title_full_unstemmed IQGAP3 in clear cell renal cell carcinoma contributes to drug resistance and genome stability
title_short IQGAP3 in clear cell renal cell carcinoma contributes to drug resistance and genome stability
title_sort iqgap3 in clear cell renal cell carcinoma contributes to drug resistance and genome stability
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9586079/
https://www.ncbi.nlm.nih.gov/pubmed/36275458
http://dx.doi.org/10.7717/peerj.14201
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