Cargando…

Haplotyping pharmacogenes using TLA combined with Illumina or Nanopore sequencing

The currently used pharmacogenetic genotyping assays offer limited haplotype information, which can potentially cause specific functional effects to be missed. This study tested if Targeted Locus Amplification (TLA), when using non-patient-specific primers combined with Illumina or Nanopore sequenci...

Descripción completa

Detalles Bibliográficos
Autores principales:	Tilleman, Laurentijn, Rubben, Kaat, Van Criekinge, Wim, Deforce, Dieter, Van Nieuwerburgh, Filip
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9587992/ https://www.ncbi.nlm.nih.gov/pubmed/36273027 http://dx.doi.org/10.1038/s41598-022-22499-0

Ejemplares similares

Targeted haplotyping in pharmacogenomics using Oxford Nanopore Technologies’ adaptive sampling
por: Deserranno, Koen, et al.
Publicado: (2023)

Cas9 targeted nanopore sequencing with enhanced variant calling improves CYP2D6-CYP2D7 hybrid allele genotyping
por: Rubben, Kaat, et al.
Publicado: (2022)

Nanopore Sequencing of a Forensic STR Multiplex Reveals Loci Suitable for Single-Contributor STR Profiling
por: Tytgat, Olivier, et al.
Publicado: (2020)

Kinship analysis on single cells after whole genome amplification
por: Weymaere, Jana, et al.
Publicado: (2020)

Illumina sequencing of 15 deafness genes using fragmented amplicons
por: Van Nieuwerburgh, Filip, et al.
Publicado: (2014)

STR profiling and Copy Number Variation analysis on single, preserved cells using current Whole Genome Amplification methods
por: Vander Plaetsen, Ann-Sophie, et al.
Publicado: (2017)

Performance of four modern whole genome amplification methods for copy number variant detection in single cells
por: Deleye, Lieselot, et al.
Publicado: (2017)

Forensic SNP Genotyping using Nanopore MinION Sequencing
por: Cornelis, Senne, et al.
Publicado: (2017)

Dual RNA Sequencing of Vitis vinifera during Lasiodiplodia theobromae Infection Unveils Host–Pathogen Interactions
por: Gonçalves, Micael F. M., et al.
Publicado: (2019)

Illumina mate-paired DNA sequencing-library preparation using Cre-Lox recombination
por: Van Nieuwerburgh, Filip, et al.
Publicado: (2012)

The transcriptome of Mycobacterium tuberculosis in a lipid-rich dormancy model through RNAseq analysis
por: Aguilar-Ayala, Diana A., et al.
Publicado: (2017)

Uncovering low-level mosaicism in human embryonic stem cells using high throughput single cell shallow sequencing
por: Keller, Alexander, et al.
Publicado: (2019)

Maternal Recognition of Pregnancy in the Horse: Are MicroRNAs the Secret Messengers?
por: Smits, Katrien, et al.
Publicado: (2020)

Quantitative Bias in Illumina TruSeq and a Novel Post Amplification Barcoding Strategy for Multiplexed DNA and Small RNA Deep Sequencing
por: Van Nieuwerburgh, Filip, et al.
Publicado: (2011)

MYCN-induced nucleolar stress drives an early senescence-like transcriptional program in hTERT-immortalized RPE cells
por: Zanotti, Sofia, et al.
Publicado: (2021)

A multi-omics analysis of the grapevine pathogen Lasiodiplodia theobromae reveals that temperature affects the expression of virulence- and pathogenicity-related genes
por: Félix, Carina, et al.
Publicado: (2019)

Tla-melaua : revista de investigaciones jurídico-políticas.
Publicado: (1990)

Structural characteristics of Tla products
Publicado: (1985)

P610: EXTRACELLULAR VESICLES FROM CHRONIC LYMPHOCYTIC LEUKEMIA CELLS INDUCE THE DIFFERENTIATION OF MONOCYTES INTO NURSE-LIKE CELLS
por: Dubois, Nathan, et al.
Publicado: (2023)

Suspension fluorescence in situ hybridization (S-FISH) combined with automatic detection and laser microdissection for STR profiling of male cells in male/female mixtures
por: Vandewoestyne, Mado, et al.
Publicado: (2009)

Practical TLA+: planning driven development
por: Wayne, Hillel
Publicado: (2018)

Activin A‐derived human embryonic stem cells show increased competence to differentiate into primordial germ cell‐like cells
por: Mishra, Swati, et al.
Publicado: (2021)

Genome Sequence of Devriesea agamarum, Isolated from Agamid Lizards with Dermatitis
por: Haesendonck, Roel, et al.
Publicado: (2015)

YtrA(Sa), a GntR-Family Transcription Factor, Represses Two Genetic Loci Encoding Membrane Proteins in Sulfolobus acidocaldarius
por: Lemmens, Liesbeth, et al.
Publicado: (2019)

Comparative genomics of Flavobacterium columnare unveils novel insights in virulence and antimicrobial resistance mechanisms
por: Declercq, Annelies Maria, et al.
Publicado: (2021)

Massively parallel sequencing of micro-manipulated cells targeting a comprehensive panel of disease-causing genes: A comparative evaluation of upstream whole-genome amplification methods
por: Deleye, Lieselot, et al.
Publicado: (2018)

Ueue'tla'toli : cuentos nahuas de la Sierra Norte de Puebla.
Publicado: (1986)

HES1 and HES4 have non-redundant roles downstream of Notch during early human T-cell development
por: De Decker, Matthias, et al.
Publicado: (2020)

Post-feeding transcriptomics reveals essential genes expressed in the midgut of the desert locust
por: Van Lommel, Joachim, et al.
Publicado: (2023)

Draft Genome Sequence of Methicillin-Resistant Staphylococcus epidermidis Strain ET-024, Isolated from an Endotracheal Tube Biofilm of a Mechanically Ventilated Patient
por: Vandecandelaere, Ilse, et al.
Publicado: (2014)

Analysing 454 amplicon resequencing experiments using the modular and database oriented Variant Identification Pipeline
por: De Schrijver, Joachim M, et al.
Publicado: (2010)

Complete Nucleotide Sequence of CTX-M-15-Plasmids from Clinical Escherichia coli Isolates: Insertional Events of Transposons and Insertion Sequences
por: Smet, Annemieke, et al.
Publicado: (2010)

Combined use of Oxford Nanopore and Illumina sequencing yields insights into soybean structural variation biology
por: Lemay, Marc-André, et al.
Publicado: (2022)

Metabolic activity, urease production, antibiotic resistance and virulence in dual species biofilms of Staphylococcus epidermidis and Staphylococcus aureus
por: Vandecandelaere, Ilse, et al.
Publicado: (2017)

Marine biogenics in sea spray aerosols interact with the mTOR signaling pathway
por: Asselman, Jana, et al.
Publicado: (2019)

Assembling the perfect bacterial genome using Oxford Nanopore and Illumina sequencing
por: Wick, Ryan R., et al.
Publicado: (2023)

Closed Genome Sequences of Clinical Neisseria gonorrhoeae Strains Obtained from Combined Oxford Nanopore and Illumina Sequencing
por: White, Richard C., et al.
Publicado: (2019)

The relevance of citrullinated vimentin in the production of antibodies against citrullinated proteins and the pathogenesis of rheumatoid arthritis
por: Van Steendam, Katleen, et al.
Publicado: (2011)

Added Value of Clinical Sequencing: WGS-Based Profiling of Pharmacogenes
por: Caspar, Sylvan M., et al.
Publicado: (2020)

Molecular diagnostics for congenital hearing loss including 15 deafness genes using a next generation sequencing platform
por: De Keulenaer, Sarah, et al.
Publicado: (2012)

Cannot write session to /tmp/vufind_sessions/sess_8vrg63dmlee01qdbkvea34i08d