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Radical Mediated Rapid In Vitro Formation of c-Type Cytochrome
A cytochrome c(552) mutant from Thermus thermophilus HB8 (rC(552) C14A) was reported, where the polypeptide with replaced Cys14 by alanine, overexpressed in the cytosol of E. coli. The apo-form of the C14A mutant (apo-C14A) without the original prosthetic group was obtained by simple chemical treatm...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9599503/ https://www.ncbi.nlm.nih.gov/pubmed/36291538 http://dx.doi.org/10.3390/biom12101329 |
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author | Ibrahim, Sheikh Muhammad Ben Aoun, Sami Nakajima, Hiroshi Kooli, Fethi Watanabe, Yoshihito |
author_facet | Ibrahim, Sheikh Muhammad Ben Aoun, Sami Nakajima, Hiroshi Kooli, Fethi Watanabe, Yoshihito |
author_sort | Ibrahim, Sheikh Muhammad |
collection | PubMed |
description | A cytochrome c(552) mutant from Thermus thermophilus HB8 (rC(552) C14A) was reported, where the polypeptide with replaced Cys14 by alanine, overexpressed in the cytosol of E. coli. The apo-form of the C14A mutant (apo-C14A) without the original prosthetic group was obtained by simple chemical treatments that retained compact conformation amenable to reconstitution with heme b and zinc(II)-protoporphyrin(IX), gradually followed by spontaneous formation of a covalent bond between the polypeptide and porphyrin ring in the reconstituted apo-C14A. Further analysis suggested that the residual Cys11 and vinyl group of the porphyrin ring linked through the thiol-ene reaction promoted by light under ambient conditions. In this study, we describe the kinetic improvement of the covalent bond formation in accordance with the mechanism of the photoinduced thiol-ene reaction, which involves a thiyl radical as a reaction intermediate. Adding a radical generator to the reconstituted C14A mutant with either heme-b or zinc(II) porphyrin accelerated the bond-forming reaction, which supported the involvement of a radical species in the reaction. Partial observation of the reconstituted C14A in a dimer form and detection of sulfuryl radical by EPR spectroscopy indicated a thiyl radical on Cys11, a unique cysteinyl residue in rC(552) C14A. The covalent bond forming mediated by the radical generator was also adaptable to the reconstituted apo-C14A with manganese(II)-protoporphyrin(IX), which also exhibits light-mediated covalent linkage formation. Therefore, the radical generator extends the versatility of producing c-type-like cytochrome starting from a metallo-protoporphyrin(IX) and the apo-C14A instantaneously. |
format | Online Article Text |
id | pubmed-9599503 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-95995032022-10-27 Radical Mediated Rapid In Vitro Formation of c-Type Cytochrome Ibrahim, Sheikh Muhammad Ben Aoun, Sami Nakajima, Hiroshi Kooli, Fethi Watanabe, Yoshihito Biomolecules Article A cytochrome c(552) mutant from Thermus thermophilus HB8 (rC(552) C14A) was reported, where the polypeptide with replaced Cys14 by alanine, overexpressed in the cytosol of E. coli. The apo-form of the C14A mutant (apo-C14A) without the original prosthetic group was obtained by simple chemical treatments that retained compact conformation amenable to reconstitution with heme b and zinc(II)-protoporphyrin(IX), gradually followed by spontaneous formation of a covalent bond between the polypeptide and porphyrin ring in the reconstituted apo-C14A. Further analysis suggested that the residual Cys11 and vinyl group of the porphyrin ring linked through the thiol-ene reaction promoted by light under ambient conditions. In this study, we describe the kinetic improvement of the covalent bond formation in accordance with the mechanism of the photoinduced thiol-ene reaction, which involves a thiyl radical as a reaction intermediate. Adding a radical generator to the reconstituted C14A mutant with either heme-b or zinc(II) porphyrin accelerated the bond-forming reaction, which supported the involvement of a radical species in the reaction. Partial observation of the reconstituted C14A in a dimer form and detection of sulfuryl radical by EPR spectroscopy indicated a thiyl radical on Cys11, a unique cysteinyl residue in rC(552) C14A. The covalent bond forming mediated by the radical generator was also adaptable to the reconstituted apo-C14A with manganese(II)-protoporphyrin(IX), which also exhibits light-mediated covalent linkage formation. Therefore, the radical generator extends the versatility of producing c-type-like cytochrome starting from a metallo-protoporphyrin(IX) and the apo-C14A instantaneously. MDPI 2022-09-20 /pmc/articles/PMC9599503/ /pubmed/36291538 http://dx.doi.org/10.3390/biom12101329 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Ibrahim, Sheikh Muhammad Ben Aoun, Sami Nakajima, Hiroshi Kooli, Fethi Watanabe, Yoshihito Radical Mediated Rapid In Vitro Formation of c-Type Cytochrome |
title | Radical Mediated Rapid In Vitro Formation of c-Type Cytochrome |
title_full | Radical Mediated Rapid In Vitro Formation of c-Type Cytochrome |
title_fullStr | Radical Mediated Rapid In Vitro Formation of c-Type Cytochrome |
title_full_unstemmed | Radical Mediated Rapid In Vitro Formation of c-Type Cytochrome |
title_short | Radical Mediated Rapid In Vitro Formation of c-Type Cytochrome |
title_sort | radical mediated rapid in vitro formation of c-type cytochrome |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9599503/ https://www.ncbi.nlm.nih.gov/pubmed/36291538 http://dx.doi.org/10.3390/biom12101329 |
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