Strain level microbial detection and quantification with applications to single cell metagenomics

Computational identification and quantification of distinct microbes from high throughput sequencing data is crucial for our understanding of human health. Existing methods either use accurate but computationally expensive alignment-based approaches or less accurate but computationally fast alignmen...

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Detalles Bibliográficos
Autores principales: Zhu, Kaiyuan, Schäffer, Alejandro A., Robinson, Welles, Xu, Junyan, Ruppin, Eytan, Ergun, A. Funda, Ye, Yuzhen, Sahinalp, S. Cenk
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9616933/
https://www.ncbi.nlm.nih.gov/pubmed/36307411
http://dx.doi.org/10.1038/s41467-022-33869-7

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9616933/
https://www.ncbi.nlm.nih.gov/pubmed/36307411
http://dx.doi.org/10.1038/s41467-022-33869-7

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