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A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries
In vitro protein display methods can access extensive libraries (e.g., 10(12)–10(14)) and play an increasingly important role in protein engineering. However, the preparation of large libraries remains a laborious and time-consuming process. Here we report an efficient one-pot ligation & elongat...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9621413/ https://www.ncbi.nlm.nih.gov/pubmed/36315516 http://dx.doi.org/10.1371/journal.pone.0276338 |
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author | Woolley, Michael Chen, Zhilei |
author_facet | Woolley, Michael Chen, Zhilei |
author_sort | Woolley, Michael |
collection | PubMed |
description | In vitro protein display methods can access extensive libraries (e.g., 10(12)–10(14)) and play an increasingly important role in protein engineering. However, the preparation of large libraries remains a laborious and time-consuming process. Here we report an efficient one-pot ligation & elongation (L&E) method for sizeable synthetic library preparation free of PCR amplification or any purification steps. As a proof of concept, we constructed an ankyrin repeat protein templated synthetic library with 10(11) variants in 150 μL volume. The entire process from the oligos to DNA template ready for transcription is linearly scalable and took merely 90 minutes. We believe this L&E method can significantly simplify the preparation of synthetic libraries and accelerate in vitro protein display experiments. |
format | Online Article Text |
id | pubmed-9621413 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-96214132022-11-01 A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries Woolley, Michael Chen, Zhilei PLoS One Research Article In vitro protein display methods can access extensive libraries (e.g., 10(12)–10(14)) and play an increasingly important role in protein engineering. However, the preparation of large libraries remains a laborious and time-consuming process. Here we report an efficient one-pot ligation & elongation (L&E) method for sizeable synthetic library preparation free of PCR amplification or any purification steps. As a proof of concept, we constructed an ankyrin repeat protein templated synthetic library with 10(11) variants in 150 μL volume. The entire process from the oligos to DNA template ready for transcription is linearly scalable and took merely 90 minutes. We believe this L&E method can significantly simplify the preparation of synthetic libraries and accelerate in vitro protein display experiments. Public Library of Science 2022-10-31 /pmc/articles/PMC9621413/ /pubmed/36315516 http://dx.doi.org/10.1371/journal.pone.0276338 Text en © 2022 Woolley, Chen https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Woolley, Michael Chen, Zhilei A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries |
title | A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries |
title_full | A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries |
title_fullStr | A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries |
title_full_unstemmed | A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries |
title_short | A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries |
title_sort | pcr-free rapid protocol for one-pot construction of highly diverse genetic libraries |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9621413/ https://www.ncbi.nlm.nih.gov/pubmed/36315516 http://dx.doi.org/10.1371/journal.pone.0276338 |
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