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A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries

In vitro protein display methods can access extensive libraries (e.g., 10(12)–10(14)) and play an increasingly important role in protein engineering. However, the preparation of large libraries remains a laborious and time-consuming process. Here we report an efficient one-pot ligation & elongat...

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Detalles Bibliográficos
Autores principales: Woolley, Michael, Chen, Zhilei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9621413/
https://www.ncbi.nlm.nih.gov/pubmed/36315516
http://dx.doi.org/10.1371/journal.pone.0276338
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author Woolley, Michael
Chen, Zhilei
author_facet Woolley, Michael
Chen, Zhilei
author_sort Woolley, Michael
collection PubMed
description In vitro protein display methods can access extensive libraries (e.g., 10(12)–10(14)) and play an increasingly important role in protein engineering. However, the preparation of large libraries remains a laborious and time-consuming process. Here we report an efficient one-pot ligation & elongation (L&E) method for sizeable synthetic library preparation free of PCR amplification or any purification steps. As a proof of concept, we constructed an ankyrin repeat protein templated synthetic library with 10(11) variants in 150 μL volume. The entire process from the oligos to DNA template ready for transcription is linearly scalable and took merely 90 minutes. We believe this L&E method can significantly simplify the preparation of synthetic libraries and accelerate in vitro protein display experiments.
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spelling pubmed-96214132022-11-01 A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries Woolley, Michael Chen, Zhilei PLoS One Research Article In vitro protein display methods can access extensive libraries (e.g., 10(12)–10(14)) and play an increasingly important role in protein engineering. However, the preparation of large libraries remains a laborious and time-consuming process. Here we report an efficient one-pot ligation & elongation (L&E) method for sizeable synthetic library preparation free of PCR amplification or any purification steps. As a proof of concept, we constructed an ankyrin repeat protein templated synthetic library with 10(11) variants in 150 μL volume. The entire process from the oligos to DNA template ready for transcription is linearly scalable and took merely 90 minutes. We believe this L&E method can significantly simplify the preparation of synthetic libraries and accelerate in vitro protein display experiments. Public Library of Science 2022-10-31 /pmc/articles/PMC9621413/ /pubmed/36315516 http://dx.doi.org/10.1371/journal.pone.0276338 Text en © 2022 Woolley, Chen https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Woolley, Michael
Chen, Zhilei
A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries
title A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries
title_full A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries
title_fullStr A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries
title_full_unstemmed A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries
title_short A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries
title_sort pcr-free rapid protocol for one-pot construction of highly diverse genetic libraries
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9621413/
https://www.ncbi.nlm.nih.gov/pubmed/36315516
http://dx.doi.org/10.1371/journal.pone.0276338
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