Cargando…

Development of machine learning models for the screening of potential HSP90 inhibitors

Heat shock protein 90 (Hsp90) is a molecular chaperone playing a significant role in the folding of client proteins. This cellular protein is linked to the progression of several cancer types, including breast cancer, lung cancer, and gastrointestinal stromal tumors. Several oncogenic kinases are Hs...

Descripción completa

Detalles Bibliográficos
Autores principales: Khan, Mohd Imran, Park, Taehwan, Imran, Mohammad Azhar, Gowda Saralamma, Venu Venkatarame, Lee, Duk Chul, Choi, Jaehyuk, Baig, Mohammad Hassan, Dong, Jae-June
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9626531/
https://www.ncbi.nlm.nih.gov/pubmed/36339714
http://dx.doi.org/10.3389/fmolb.2022.967510
_version_ 1784822754608939008
author Khan, Mohd Imran
Park, Taehwan
Imran, Mohammad Azhar
Gowda Saralamma, Venu Venkatarame
Lee, Duk Chul
Choi, Jaehyuk
Baig, Mohammad Hassan
Dong, Jae-June
author_facet Khan, Mohd Imran
Park, Taehwan
Imran, Mohammad Azhar
Gowda Saralamma, Venu Venkatarame
Lee, Duk Chul
Choi, Jaehyuk
Baig, Mohammad Hassan
Dong, Jae-June
author_sort Khan, Mohd Imran
collection PubMed
description Heat shock protein 90 (Hsp90) is a molecular chaperone playing a significant role in the folding of client proteins. This cellular protein is linked to the progression of several cancer types, including breast cancer, lung cancer, and gastrointestinal stromal tumors. Several oncogenic kinases are Hsp90 clients and their activity depends on this molecular chaperone. This makes HSP90 a prominent therapeutic target for cancer treatment. Studies have confirmed the inhibition of HSP90 as a striking therapeutic treatment for cancer management. In this study, we have utilized machine learning and different in silico approaches to screen the KCB database to identify the potential HSP90 inhibitors. Further evaluation of these inhibitors on various cancer cell lines showed favorable inhibitory activity. These inhibitors could serve as a basis for future development of effective HSP90 inhibitors.
format Online
Article
Text
id pubmed-9626531
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-96265312022-11-03 Development of machine learning models for the screening of potential HSP90 inhibitors Khan, Mohd Imran Park, Taehwan Imran, Mohammad Azhar Gowda Saralamma, Venu Venkatarame Lee, Duk Chul Choi, Jaehyuk Baig, Mohammad Hassan Dong, Jae-June Front Mol Biosci Molecular Biosciences Heat shock protein 90 (Hsp90) is a molecular chaperone playing a significant role in the folding of client proteins. This cellular protein is linked to the progression of several cancer types, including breast cancer, lung cancer, and gastrointestinal stromal tumors. Several oncogenic kinases are Hsp90 clients and their activity depends on this molecular chaperone. This makes HSP90 a prominent therapeutic target for cancer treatment. Studies have confirmed the inhibition of HSP90 as a striking therapeutic treatment for cancer management. In this study, we have utilized machine learning and different in silico approaches to screen the KCB database to identify the potential HSP90 inhibitors. Further evaluation of these inhibitors on various cancer cell lines showed favorable inhibitory activity. These inhibitors could serve as a basis for future development of effective HSP90 inhibitors. Frontiers Media S.A. 2022-10-19 /pmc/articles/PMC9626531/ /pubmed/36339714 http://dx.doi.org/10.3389/fmolb.2022.967510 Text en Copyright © 2022 Khan, Park, Imran, Gowda Saralamma, Lee, Choi, Baig and Dong. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Molecular Biosciences
Khan, Mohd Imran
Park, Taehwan
Imran, Mohammad Azhar
Gowda Saralamma, Venu Venkatarame
Lee, Duk Chul
Choi, Jaehyuk
Baig, Mohammad Hassan
Dong, Jae-June
Development of machine learning models for the screening of potential HSP90 inhibitors
title Development of machine learning models for the screening of potential HSP90 inhibitors
title_full Development of machine learning models for the screening of potential HSP90 inhibitors
title_fullStr Development of machine learning models for the screening of potential HSP90 inhibitors
title_full_unstemmed Development of machine learning models for the screening of potential HSP90 inhibitors
title_short Development of machine learning models for the screening of potential HSP90 inhibitors
title_sort development of machine learning models for the screening of potential hsp90 inhibitors
topic Molecular Biosciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9626531/
https://www.ncbi.nlm.nih.gov/pubmed/36339714
http://dx.doi.org/10.3389/fmolb.2022.967510
work_keys_str_mv AT khanmohdimran developmentofmachinelearningmodelsforthescreeningofpotentialhsp90inhibitors
AT parktaehwan developmentofmachinelearningmodelsforthescreeningofpotentialhsp90inhibitors
AT imranmohammadazhar developmentofmachinelearningmodelsforthescreeningofpotentialhsp90inhibitors
AT gowdasaralammavenuvenkatarame developmentofmachinelearningmodelsforthescreeningofpotentialhsp90inhibitors
AT leedukchul developmentofmachinelearningmodelsforthescreeningofpotentialhsp90inhibitors
AT choijaehyuk developmentofmachinelearningmodelsforthescreeningofpotentialhsp90inhibitors
AT baigmohammadhassan developmentofmachinelearningmodelsforthescreeningofpotentialhsp90inhibitors
AT dongjaejune developmentofmachinelearningmodelsforthescreeningofpotentialhsp90inhibitors