Cargando…

GMMchi: gene expression clustering using Gaussian mixture modeling

BACKGROUND: Cancer evolution consists of a stepwise acquisition of genetic and epigenetic changes, which alter the gene expression profiles of cells in a particular tissue and result in phenotypic alterations acted upon by natural selection. The recurrent appearance of specific genetic lesions acros...

Descripción completa

Detalles Bibliográficos
Autores principales:	Liu, Ta-Chun, Kalugin, Peter N., Wilding, Jennifer L., Bodmer, Walter F.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2022
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9632092/ https://www.ncbi.nlm.nih.gov/pubmed/36324085 http://dx.doi.org/10.1186/s12859-022-05006-0

Ejemplares similares

Clustering gene expression time series data using an infinite Gaussian process mixture model
por: McDowell, Ian C., et al.
Publicado: (2018)

Avoiding inferior clusterings with misspecified Gaussian mixture models
por: Kasa, Siva Rajesh, et al.
Publicado: (2023)

Model-based clustering based on sparse finite Gaussian mixtures
por: Malsiner-Walli, Gertraud, et al.
Publicado: (2014)

Combined Gaussian Mixture Model and Pathfinder Algorithm for Data Clustering
por: Huang, Huajuan, et al.
Publicado: (2023)

A Nonparametric Model for Multi-Manifold Clustering with Mixture of Gaussians and Graph Consistency
por: Ye, Xulun, et al.
Publicado: (2018)

Spike sorting with Gaussian mixture models
por: Souza, Bryan C., et al.
Publicado: (2019)

A joint finite mixture model for clustering genes from independent Gaussian and beta distributed data
por: Dai, Xiaofeng, et al.
Publicado: (2009)

Variational Information Bottleneck for Unsupervised Clustering: Deep Gaussian Mixture Embedding
por: Uğur, Yiğit, et al.
Publicado: (2020)

Efficient Clustering for Continuous Occupancy Mapping Using a Mixture of Gaussian Processes †
por: Kim, Soohwan, et al.
Publicado: (2022)

Real-Time EEG Signal Enhancement Using Canonical Correlation Analysis and Gaussian Mixture Clustering
por: Lin, Chin-Teng, et al.
Publicado: (2018)

Gaussian Mixture Model of Heart Rate Variability
por: Costa, Tommaso, et al.
Publicado: (2012)

A Fast Incremental Gaussian Mixture Model
por: Pinto, Rafael Coimbra, et al.
Publicado: (2015)

Fitting Gaussian mixture models on incomplete data
por: McCaw, Zachary R., et al.
Publicado: (2022)

Heart sound classification using Gaussian mixture model
por: Shervegar, Madhava Vishwanath, et al.
Publicado: (2018)

Performance Evaluation of Missing-Value Imputation Clustering Based on a Multivariate Gaussian Mixture Model
por: Xiao, Jing, et al.
Publicado: (2016)

Solution strategy based on Gaussian mixture models and dispersion reduction for the capacitated centered clustering problem
por: Caballero-Morales, Santiago-Omar
Publicado: (2021)

Adaptive filtering of microarray gene expression data based on Gaussian mixture decomposition
por: Marczyk, Michal, et al.
Publicado: (2013)

Correction: A Fast Incremental Gaussian Mixture Model
por: Pinto, Rafael Coimbra, et al.
Publicado: (2015)

Supervoxel Segmentation with Voxel-Related Gaussian Mixture Model
por: Ban, Zhihua, et al.
Publicado: (2018)

Correction: Fitting Gaussian mixture models on incomplete data
por: McCaw, Zachary R., et al.
Publicado: (2022)

Modeling and prediction of COVID-19 pandemic using Gaussian mixture model
por: Singhal, Amit, et al.
Publicado: (2020)

A Batch Rival Penalized Expectation-Maximization Algorithm for Gaussian Mixture Clustering with Automatic Model Selection
por: Wen, Jiechang, et al.
Publicado: (2012)

Discovering Condition-Specific Gene Co-Expression Patterns Using Gaussian Mixture Models: A Cancer Case Study
por: Ficklin, Stephen P., et al.
Publicado: (2017)

Outdoor THz fading modeling by means of gaussian and gamma mixture distributions
por: Papasotiriou, Evangelos N., et al.
Publicado: (2023)

Segway 2.0: Gaussian mixture models and minibatch training
por: Chan, Rachel C W, et al.
Publicado: (2018)

Gaussian Mixture Models for Control of Quasi-Passive Spinal Exoskeletons
por: Jamšek, Marko, et al.
Publicado: (2020)

Research on a Segmentation Algorithm for the Tujia Brocade Images Based on Unsupervised Gaussian Mixture Clustering
por: He, Shuqi
Publicado: (2021)

Mixtures of Conditional Gaussian Scale Mixtures Applied to Multiscale Image Representations
por: Theis, Lucas, et al.
Publicado: (2012)

The impact of ordinal scales on Gaussian mixture recovery
por: Haslbeck, Jonas M. B., et al.
Publicado: (2022)

Determine the myocardial T2* cut-off value in thalassemia using gaussian mixtures models
por: He, Taigang, et al.
Publicado: (2012)

Unsupervised assessment of microarray data quality using a Gaussian mixture model
por: Howard, Brian E, et al.
Publicado: (2009)

A univocal definition of the neuronal soma morphology using Gaussian mixture models
por: Luengo-Sanchez, Sergio, et al.
Publicado: (2015)

Heterogeneity in pulmonary emphysema: Analysis of CT attenuation using Gaussian mixture model
por: Nishio, Mizuho, et al.
Publicado: (2018)

Gaussian mixture model for texture characterization with application to brain DTI images
por: Moraru, Luminita, et al.
Publicado: (2019)

Sharp Guarantees and Optimal Performance for Inference in Binary and Gaussian-Mixture Models †
por: Taheri, Hossein, et al.
Publicado: (2021)

Nanopower Integrated Gaussian Mixture Model Classifier for Epileptic Seizure Prediction
por: Alimisis, Vassilis, et al.
Publicado: (2022)

A new iterative initialization of EM algorithm for Gaussian mixture models
por: You, Jie, et al.
Publicado: (2023)

Improving Resolution and Resolvability of Single Particle CryoEM Structures using Gaussian Mixture Models
por: Chen, Muyuan, et al.
Publicado: (2023)

A Local Neighborhood Robust Fuzzy Clustering Image Segmentation Algorithm Based on an Adaptive Feature Selection Gaussian Mixture Model
por: Ren, Hang, et al.
Publicado: (2020)

Classifying patients with depressive and anxiety disorders according to symptom network structures: A Gaussian graphical mixture model-based clustering
por: Kashihara, Jun, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_l31vc2rh9jbingenvi5q8lcofj