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Mapping-friendly sequence reductions: Going beyond homopolymer compression
Sequencing errors continue to pose algorithmic challenges to methods working with sequencing data. One of the simplest and most prevalent techniques for ameliorating the detrimental effects of homopolymer expansion/contraction errors present in long reads is homopolymer compression. It collapses run...
Autores principales: | Blassel, Luc, Medvedev, Paul, Chikhi, Rayan |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9633736/ https://www.ncbi.nlm.nih.gov/pubmed/36339268 http://dx.doi.org/10.1016/j.isci.2022.105305 |
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