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PhaMMseqs: a new pipeline for constructing phage gene phamilies using MMseqs2

The diversity and mosaic architecture of phage genomes present challenges for whole-genome phylogenies and comparative genomics. There are no universally conserved core genes, ∼70% of phage genes are of unknown function, and phage genomes are replete with small (<500 bp) open reading frames. Asse...

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Detalles Bibliográficos
Autores principales: Gauthier, Christian H, Cresawn, Steven G, Hatfull, Graham F
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9635663/
https://www.ncbi.nlm.nih.gov/pubmed/36161315
http://dx.doi.org/10.1093/g3journal/jkac233