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VeChat: correcting errors in long reads using variation graphs

Error correction is the canonical first step in long-read sequencing data analysis. Current self-correction methods, however, are affected by consensus sequence induced biases that mask true variants in haplotypes of lower frequency showing in mixed samples. Unlike consensus sequence templates, grap...

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Detalles Bibliográficos
Autores principales: Luo, Xiao, Kang, Xiongbin, Schönhuth, Alexander
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9636371/
https://www.ncbi.nlm.nih.gov/pubmed/36333324
http://dx.doi.org/10.1038/s41467-022-34381-8