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Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB

[Image: see text] Controlling the reactivity of high-valent Fe(IV)–O catalytic intermediates, Compounds I and II, generated in heme enzymes upon reaction with dioxygen or hydrogen peroxide, is important for function. It has been hypothesized that the presence (wet) or absence (dry) of distal heme po...

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Autores principales: Lučić, Marina, Wilson, Michael T., Tosha, Takehiko, Sugimoto, Hiroshi, Shilova, Anastasya, Axford, Danny, Owen, Robin L., Hough, Michael A., Worrall, Jonathan A. R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9638988/
https://www.ncbi.nlm.nih.gov/pubmed/36366763
http://dx.doi.org/10.1021/acscatal.2c03754
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author Lučić, Marina
Wilson, Michael T.
Tosha, Takehiko
Sugimoto, Hiroshi
Shilova, Anastasya
Axford, Danny
Owen, Robin L.
Hough, Michael A.
Worrall, Jonathan A. R.
author_facet Lučić, Marina
Wilson, Michael T.
Tosha, Takehiko
Sugimoto, Hiroshi
Shilova, Anastasya
Axford, Danny
Owen, Robin L.
Hough, Michael A.
Worrall, Jonathan A. R.
author_sort Lučić, Marina
collection PubMed
description [Image: see text] Controlling the reactivity of high-valent Fe(IV)–O catalytic intermediates, Compounds I and II, generated in heme enzymes upon reaction with dioxygen or hydrogen peroxide, is important for function. It has been hypothesized that the presence (wet) or absence (dry) of distal heme pocket water molecules can influence whether Compound I undergoes sequential one-electron additions or a concerted two-electron reduction. To test this hypothesis, we investigate the role of water in the heme distal pocket of a dye-decolorizing peroxidase utilizing a combination of serial femtosecond crystallography and rapid kinetic studies. In a dry distal heme site, Compound I reduction proceeds through a mechanism in which Compound II concentration is low. This reaction shows a strong deuterium isotope effect, indicating that reduction is coupled to proton uptake. The resulting protonated Compound II (Fe(IV)–OH) rapidly reduces to the ferric state, giving the appearance of a two-electron transfer process. In a wet site, reduction of Compound I is faster, has no deuterium effect, and yields highly populated Compound II, which is subsequently reduced to the ferric form. This work provides a definitive experimental test of the hypothesis advanced in the literature that relates sequential or concerted electron transfer to Compound I in wet or dry distal heme sites.
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spelling pubmed-96389882022-11-08 Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB Lučić, Marina Wilson, Michael T. Tosha, Takehiko Sugimoto, Hiroshi Shilova, Anastasya Axford, Danny Owen, Robin L. Hough, Michael A. Worrall, Jonathan A. R. ACS Catal [Image: see text] Controlling the reactivity of high-valent Fe(IV)–O catalytic intermediates, Compounds I and II, generated in heme enzymes upon reaction with dioxygen or hydrogen peroxide, is important for function. It has been hypothesized that the presence (wet) or absence (dry) of distal heme pocket water molecules can influence whether Compound I undergoes sequential one-electron additions or a concerted two-electron reduction. To test this hypothesis, we investigate the role of water in the heme distal pocket of a dye-decolorizing peroxidase utilizing a combination of serial femtosecond crystallography and rapid kinetic studies. In a dry distal heme site, Compound I reduction proceeds through a mechanism in which Compound II concentration is low. This reaction shows a strong deuterium isotope effect, indicating that reduction is coupled to proton uptake. The resulting protonated Compound II (Fe(IV)–OH) rapidly reduces to the ferric state, giving the appearance of a two-electron transfer process. In a wet site, reduction of Compound I is faster, has no deuterium effect, and yields highly populated Compound II, which is subsequently reduced to the ferric form. This work provides a definitive experimental test of the hypothesis advanced in the literature that relates sequential or concerted electron transfer to Compound I in wet or dry distal heme sites. American Chemical Society 2022-10-18 2022-11-04 /pmc/articles/PMC9638988/ /pubmed/36366763 http://dx.doi.org/10.1021/acscatal.2c03754 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Lučić, Marina
Wilson, Michael T.
Tosha, Takehiko
Sugimoto, Hiroshi
Shilova, Anastasya
Axford, Danny
Owen, Robin L.
Hough, Michael A.
Worrall, Jonathan A. R.
Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB
title Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB
title_full Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB
title_fullStr Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB
title_full_unstemmed Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB
title_short Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB
title_sort serial femtosecond crystallography reveals the role of water in the one- or two-electron redox chemistry of compound i in the catalytic cycle of the b-type dye-decolorizing peroxidase dtpb
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9638988/
https://www.ncbi.nlm.nih.gov/pubmed/36366763
http://dx.doi.org/10.1021/acscatal.2c03754
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