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Novel ciprofloxacin and norfloxacin-tetrazole hybrids as potential antibacterial and antiviral agents: Targeting S. aureus topoisomerase and SARS-CoV-2-MPro

This study was designed to synthesize hybridizing molecules from ciprofloxacin and norfloxacin by enhancing their biological activity with tetrazoles. The synthesized compounds were investigated in the interaction with the target enzyme of fluoroquinolones (DNA gyrase) and COVID-19 main protease usi...

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Autores principales: Cardoso-Ortiz, Jaime, Leyva-Ramos, Socorro, Baines, Kim M., Gómez-Durán, Cesar Fernando Azael, Hernández-López, Hiram, Palacios-Can, Francisco José, Valcarcel-Gamiño, José Antonio, Leyva-Peralta, Mario Alberto, Razo-Hernández, Rodrigo Said
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9640164/
https://www.ncbi.nlm.nih.gov/pubmed/36406777
http://dx.doi.org/10.1016/j.molstruc.2022.134507
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author Cardoso-Ortiz, Jaime
Leyva-Ramos, Socorro
Baines, Kim M.
Gómez-Durán, Cesar Fernando Azael
Hernández-López, Hiram
Palacios-Can, Francisco José
Valcarcel-Gamiño, José Antonio
Leyva-Peralta, Mario Alberto
Razo-Hernández, Rodrigo Said
author_facet Cardoso-Ortiz, Jaime
Leyva-Ramos, Socorro
Baines, Kim M.
Gómez-Durán, Cesar Fernando Azael
Hernández-López, Hiram
Palacios-Can, Francisco José
Valcarcel-Gamiño, José Antonio
Leyva-Peralta, Mario Alberto
Razo-Hernández, Rodrigo Said
author_sort Cardoso-Ortiz, Jaime
collection PubMed
description This study was designed to synthesize hybridizing molecules from ciprofloxacin and norfloxacin by enhancing their biological activity with tetrazoles. The synthesized compounds were investigated in the interaction with the target enzyme of fluoroquinolones (DNA gyrase) and COVID-19 main protease using molecular similarity, molecular docking, and QSAR studies. A QSAR study was carried out to explore the antibacterial activity of our compounds over Staphylococcus aureus a QSAR study, using descriptors obtained from the docking with DNA gyrase, in combination with steric type descriptors, was done obtaining suitable statistical parameters ([Formula: see text] , [Formula: see text] , and [Formula: see text]) to support our results. The binding interaction of our compounds with CoV-2-Mpro was done by molecular docking and were compared with different covalent and non-covalent inhibitors of this enzyme. For the docking studies we used several crystallographic structures of the CoV-2-Mpro. The interaction energy values and binding mode with several key residues, by our compounds, support the capability of them to be CoV-2-Mpro inhibitors. The characterization of the compounds was completed using FT-IR, (1)H-NMR, (13)C-NMR, (19)F-NMR and HRMS spectroscopic methods. The results showed that compounds 1, 4, 5, 10 and 12 had the potential to be further studied as new antibacterial and antiviral compounds
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spelling pubmed-96401642022-11-14 Novel ciprofloxacin and norfloxacin-tetrazole hybrids as potential antibacterial and antiviral agents: Targeting S. aureus topoisomerase and SARS-CoV-2-MPro Cardoso-Ortiz, Jaime Leyva-Ramos, Socorro Baines, Kim M. Gómez-Durán, Cesar Fernando Azael Hernández-López, Hiram Palacios-Can, Francisco José Valcarcel-Gamiño, José Antonio Leyva-Peralta, Mario Alberto Razo-Hernández, Rodrigo Said J Mol Struct Article This study was designed to synthesize hybridizing molecules from ciprofloxacin and norfloxacin by enhancing their biological activity with tetrazoles. The synthesized compounds were investigated in the interaction with the target enzyme of fluoroquinolones (DNA gyrase) and COVID-19 main protease using molecular similarity, molecular docking, and QSAR studies. A QSAR study was carried out to explore the antibacterial activity of our compounds over Staphylococcus aureus a QSAR study, using descriptors obtained from the docking with DNA gyrase, in combination with steric type descriptors, was done obtaining suitable statistical parameters ([Formula: see text] , [Formula: see text] , and [Formula: see text]) to support our results. The binding interaction of our compounds with CoV-2-Mpro was done by molecular docking and were compared with different covalent and non-covalent inhibitors of this enzyme. For the docking studies we used several crystallographic structures of the CoV-2-Mpro. The interaction energy values and binding mode with several key residues, by our compounds, support the capability of them to be CoV-2-Mpro inhibitors. The characterization of the compounds was completed using FT-IR, (1)H-NMR, (13)C-NMR, (19)F-NMR and HRMS spectroscopic methods. The results showed that compounds 1, 4, 5, 10 and 12 had the potential to be further studied as new antibacterial and antiviral compounds Elsevier B.V. 2023-02-15 2022-11-07 /pmc/articles/PMC9640164/ /pubmed/36406777 http://dx.doi.org/10.1016/j.molstruc.2022.134507 Text en © 2022 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Cardoso-Ortiz, Jaime
Leyva-Ramos, Socorro
Baines, Kim M.
Gómez-Durán, Cesar Fernando Azael
Hernández-López, Hiram
Palacios-Can, Francisco José
Valcarcel-Gamiño, José Antonio
Leyva-Peralta, Mario Alberto
Razo-Hernández, Rodrigo Said
Novel ciprofloxacin and norfloxacin-tetrazole hybrids as potential antibacterial and antiviral agents: Targeting S. aureus topoisomerase and SARS-CoV-2-MPro
title Novel ciprofloxacin and norfloxacin-tetrazole hybrids as potential antibacterial and antiviral agents: Targeting S. aureus topoisomerase and SARS-CoV-2-MPro
title_full Novel ciprofloxacin and norfloxacin-tetrazole hybrids as potential antibacterial and antiviral agents: Targeting S. aureus topoisomerase and SARS-CoV-2-MPro
title_fullStr Novel ciprofloxacin and norfloxacin-tetrazole hybrids as potential antibacterial and antiviral agents: Targeting S. aureus topoisomerase and SARS-CoV-2-MPro
title_full_unstemmed Novel ciprofloxacin and norfloxacin-tetrazole hybrids as potential antibacterial and antiviral agents: Targeting S. aureus topoisomerase and SARS-CoV-2-MPro
title_short Novel ciprofloxacin and norfloxacin-tetrazole hybrids as potential antibacterial and antiviral agents: Targeting S. aureus topoisomerase and SARS-CoV-2-MPro
title_sort novel ciprofloxacin and norfloxacin-tetrazole hybrids as potential antibacterial and antiviral agents: targeting s. aureus topoisomerase and sars-cov-2-mpro
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9640164/
https://www.ncbi.nlm.nih.gov/pubmed/36406777
http://dx.doi.org/10.1016/j.molstruc.2022.134507
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