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Bayesian Cross-Validation Comparison of Amino Acid Replacement Models: Contrasting Profile Mixtures, Pairwise Exchangeabilities, and Gamma-Distributed Rates-Across-Sites

Models of amino acid replacement are central to modern phylogenetic inference, particularly so when dealing with deep evolutionary relationships. Traditionally, a single, empirically derived matrix was utilized, so as to keep the degrees-of-freedom of the inference low, and focused on topology. With...

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Detalles Bibliográficos
Autores principales: Bujaki, Thomas, Rodrigue, Nicolas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9643205/
https://www.ncbi.nlm.nih.gov/pubmed/36207534
http://dx.doi.org/10.1007/s00239-022-10076-y