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De novo identification of microbial contaminants in low microbial biomass microbiomes with Squeegee

Computational analysis of host-associated microbiomes has opened the door to numerous discoveries relevant to human health and disease. However, contaminant sequences in metagenomic samples can potentially impact the interpretation of findings reported in microbiome studies, especially in low-biomas...

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Detalles Bibliográficos
Autores principales: Liu, Yunxi, Elworth, R. A. Leo, Jochum, Michael D., Aagaard, Kjersti M., Treangen, Todd J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9649624/
https://www.ncbi.nlm.nih.gov/pubmed/36357382
http://dx.doi.org/10.1038/s41467-022-34409-z