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Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients
Tacrolimus (TAC) is an immunosuppressant widely used in kidney transplantation. TAC displays considerable interindividual variability in pharmacokinetics (PKs). Genetic and clinical factors play important roles in TAC PKs. We enrolled a total of 251 Chinese renal transplant recipients and conducted...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9652447/ https://www.ncbi.nlm.nih.gov/pubmed/35977080 http://dx.doi.org/10.1111/cts.13388 |
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author | Yang, Siyao Jiang, Haixia Li, Chengcheng Lu, Huijie Li, Chuanjiang Ye, Demei Qi, Huana Xu, Wenbin Bao, Xiaojie Maseko, Nicola Zhang, Siqi Shao, Ruifan Li, Liang |
author_facet | Yang, Siyao Jiang, Haixia Li, Chengcheng Lu, Huijie Li, Chuanjiang Ye, Demei Qi, Huana Xu, Wenbin Bao, Xiaojie Maseko, Nicola Zhang, Siqi Shao, Ruifan Li, Liang |
author_sort | Yang, Siyao |
collection | PubMed |
description | Tacrolimus (TAC) is an immunosuppressant widely used in kidney transplantation. TAC displays considerable interindividual variability in pharmacokinetics (PKs). Genetic and clinical factors play important roles in TAC PKs. We enrolled a total of 251 Chinese renal transplant recipients and conducted a genomewide association study (GWAS), linkage disequilibrium (LD), and one‐way analysis of variance (ANOVA) to find genetic variants affecting log‐transformed TAC trough blood concentration/dose ratio (log[C (0)/D]). In addition, we performed dual luciferase reporter gene assays and multivariate regression models to evaluate the effect of the genetic variants. The GWAS results showed that all 23 genomewide significant single‐nucleotide polymorphisms (p < 5 × 10(−8)) were located on chromosome 7, including CYP3A5*3. LD, conditional association analysis, and one‐way ANOVA showed that rs75125371 T > C independently influenced TAC log(C (0)/D). Dual luciferase reporter gene assays indicated that rs75125371 minor allele (C) was significantly associated with increased normalized luciferase activity than the major allele (T) in the Huh7 cells (p = 1.2 × 10(−5)) and HepaRG cells (p = 0.0097). A model inclusive of age, sex, hematocrit, CYP3A5*3, and rs75125371 explained 37.34% variance in TAC C (0). These results suggest that rs75125371 T > C is a functional and population‐specific variant affecting TAC C (0) in Chinese renal transplant recipients. |
format | Online Article Text |
id | pubmed-9652447 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-96524472022-11-14 Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients Yang, Siyao Jiang, Haixia Li, Chengcheng Lu, Huijie Li, Chuanjiang Ye, Demei Qi, Huana Xu, Wenbin Bao, Xiaojie Maseko, Nicola Zhang, Siqi Shao, Ruifan Li, Liang Clin Transl Sci Research Tacrolimus (TAC) is an immunosuppressant widely used in kidney transplantation. TAC displays considerable interindividual variability in pharmacokinetics (PKs). Genetic and clinical factors play important roles in TAC PKs. We enrolled a total of 251 Chinese renal transplant recipients and conducted a genomewide association study (GWAS), linkage disequilibrium (LD), and one‐way analysis of variance (ANOVA) to find genetic variants affecting log‐transformed TAC trough blood concentration/dose ratio (log[C (0)/D]). In addition, we performed dual luciferase reporter gene assays and multivariate regression models to evaluate the effect of the genetic variants. The GWAS results showed that all 23 genomewide significant single‐nucleotide polymorphisms (p < 5 × 10(−8)) were located on chromosome 7, including CYP3A5*3. LD, conditional association analysis, and one‐way ANOVA showed that rs75125371 T > C independently influenced TAC log(C (0)/D). Dual luciferase reporter gene assays indicated that rs75125371 minor allele (C) was significantly associated with increased normalized luciferase activity than the major allele (T) in the Huh7 cells (p = 1.2 × 10(−5)) and HepaRG cells (p = 0.0097). A model inclusive of age, sex, hematocrit, CYP3A5*3, and rs75125371 explained 37.34% variance in TAC C (0). These results suggest that rs75125371 T > C is a functional and population‐specific variant affecting TAC C (0) in Chinese renal transplant recipients. John Wiley and Sons Inc. 2022-08-28 2022-11 /pmc/articles/PMC9652447/ /pubmed/35977080 http://dx.doi.org/10.1111/cts.13388 Text en © 2022 The Authors. Clinical and Translational Science published by Wiley Periodicals LLC on behalf of American Society for Clinical Pharmacology and Therapeutics. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Research Yang, Siyao Jiang, Haixia Li, Chengcheng Lu, Huijie Li, Chuanjiang Ye, Demei Qi, Huana Xu, Wenbin Bao, Xiaojie Maseko, Nicola Zhang, Siqi Shao, Ruifan Li, Liang Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients |
title | Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients |
title_full | Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients |
title_fullStr | Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients |
title_full_unstemmed | Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients |
title_short | Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients |
title_sort | genomewide association study identifies a novel variant associated with tacrolimus trough concentration in chinese renal transplant recipients |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9652447/ https://www.ncbi.nlm.nih.gov/pubmed/35977080 http://dx.doi.org/10.1111/cts.13388 |
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