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Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients

Tacrolimus (TAC) is an immunosuppressant widely used in kidney transplantation. TAC displays considerable interindividual variability in pharmacokinetics (PKs). Genetic and clinical factors play important roles in TAC PKs. We enrolled a total of 251 Chinese renal transplant recipients and conducted...

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Detalles Bibliográficos
Autores principales: Yang, Siyao, Jiang, Haixia, Li, Chengcheng, Lu, Huijie, Li, Chuanjiang, Ye, Demei, Qi, Huana, Xu, Wenbin, Bao, Xiaojie, Maseko, Nicola, Zhang, Siqi, Shao, Ruifan, Li, Liang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9652447/
https://www.ncbi.nlm.nih.gov/pubmed/35977080
http://dx.doi.org/10.1111/cts.13388
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author Yang, Siyao
Jiang, Haixia
Li, Chengcheng
Lu, Huijie
Li, Chuanjiang
Ye, Demei
Qi, Huana
Xu, Wenbin
Bao, Xiaojie
Maseko, Nicola
Zhang, Siqi
Shao, Ruifan
Li, Liang
author_facet Yang, Siyao
Jiang, Haixia
Li, Chengcheng
Lu, Huijie
Li, Chuanjiang
Ye, Demei
Qi, Huana
Xu, Wenbin
Bao, Xiaojie
Maseko, Nicola
Zhang, Siqi
Shao, Ruifan
Li, Liang
author_sort Yang, Siyao
collection PubMed
description Tacrolimus (TAC) is an immunosuppressant widely used in kidney transplantation. TAC displays considerable interindividual variability in pharmacokinetics (PKs). Genetic and clinical factors play important roles in TAC PKs. We enrolled a total of 251 Chinese renal transplant recipients and conducted a genomewide association study (GWAS), linkage disequilibrium (LD), and one‐way analysis of variance (ANOVA) to find genetic variants affecting log‐transformed TAC trough blood concentration/dose ratio (log[C (0)/D]). In addition, we performed dual luciferase reporter gene assays and multivariate regression models to evaluate the effect of the genetic variants. The GWAS results showed that all 23 genomewide significant single‐nucleotide polymorphisms (p < 5 × 10(−8)) were located on chromosome 7, including CYP3A5*3. LD, conditional association analysis, and one‐way ANOVA showed that rs75125371 T > C independently influenced TAC log(C (0)/D). Dual luciferase reporter gene assays indicated that rs75125371 minor allele (C) was significantly associated with increased normalized luciferase activity than the major allele (T) in the Huh7 cells (p = 1.2 × 10(−5)) and HepaRG cells (p = 0.0097). A model inclusive of age, sex, hematocrit, CYP3A5*3, and rs75125371 explained 37.34% variance in TAC C (0). These results suggest that rs75125371 T > C is a functional and population‐specific variant affecting TAC C (0) in Chinese renal transplant recipients.
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spelling pubmed-96524472022-11-14 Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients Yang, Siyao Jiang, Haixia Li, Chengcheng Lu, Huijie Li, Chuanjiang Ye, Demei Qi, Huana Xu, Wenbin Bao, Xiaojie Maseko, Nicola Zhang, Siqi Shao, Ruifan Li, Liang Clin Transl Sci Research Tacrolimus (TAC) is an immunosuppressant widely used in kidney transplantation. TAC displays considerable interindividual variability in pharmacokinetics (PKs). Genetic and clinical factors play important roles in TAC PKs. We enrolled a total of 251 Chinese renal transplant recipients and conducted a genomewide association study (GWAS), linkage disequilibrium (LD), and one‐way analysis of variance (ANOVA) to find genetic variants affecting log‐transformed TAC trough blood concentration/dose ratio (log[C (0)/D]). In addition, we performed dual luciferase reporter gene assays and multivariate regression models to evaluate the effect of the genetic variants. The GWAS results showed that all 23 genomewide significant single‐nucleotide polymorphisms (p < 5 × 10(−8)) were located on chromosome 7, including CYP3A5*3. LD, conditional association analysis, and one‐way ANOVA showed that rs75125371 T > C independently influenced TAC log(C (0)/D). Dual luciferase reporter gene assays indicated that rs75125371 minor allele (C) was significantly associated with increased normalized luciferase activity than the major allele (T) in the Huh7 cells (p = 1.2 × 10(−5)) and HepaRG cells (p = 0.0097). A model inclusive of age, sex, hematocrit, CYP3A5*3, and rs75125371 explained 37.34% variance in TAC C (0). These results suggest that rs75125371 T > C is a functional and population‐specific variant affecting TAC C (0) in Chinese renal transplant recipients. John Wiley and Sons Inc. 2022-08-28 2022-11 /pmc/articles/PMC9652447/ /pubmed/35977080 http://dx.doi.org/10.1111/cts.13388 Text en © 2022 The Authors. Clinical and Translational Science published by Wiley Periodicals LLC on behalf of American Society for Clinical Pharmacology and Therapeutics. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Research
Yang, Siyao
Jiang, Haixia
Li, Chengcheng
Lu, Huijie
Li, Chuanjiang
Ye, Demei
Qi, Huana
Xu, Wenbin
Bao, Xiaojie
Maseko, Nicola
Zhang, Siqi
Shao, Ruifan
Li, Liang
Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients
title Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients
title_full Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients
title_fullStr Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients
title_full_unstemmed Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients
title_short Genomewide association study identifies a novel variant associated with tacrolimus trough concentration in Chinese renal transplant recipients
title_sort genomewide association study identifies a novel variant associated with tacrolimus trough concentration in chinese renal transplant recipients
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9652447/
https://www.ncbi.nlm.nih.gov/pubmed/35977080
http://dx.doi.org/10.1111/cts.13388
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