Cargando…

Arginine ADP-Ribosylation: Chemical Synthesis of Post-Translationally Modified Ubiquitin Proteins

[Image: see text] We describe the development and optimization of a methodology to prepare peptides and proteins modified on the arginine residue with an adenosine-di-phosphate-ribosyl (ADPr) group. Our method comprises reacting an ornithine containing polypeptide on-resin with an α-linked anomeric...

Descripción completa

Detalles Bibliográficos
Autores principales: Voorneveld, Jim, Kloet, Max S., Wijngaarden, Sven, Kim, Robbert Q., Moutsiopoulou, Angeliki, Verdegaal, Marnix, Misra, Mohit, Đikić, Ivan, van der Marel, Gijsbert A., Overkleeft, Herman S., Filippov, Dmitri V., van der Heden van Noort, Gerbrand J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9673145/
https://www.ncbi.nlm.nih.gov/pubmed/36318515
http://dx.doi.org/10.1021/jacs.2c06249
_version_ 1784832888867389440
author Voorneveld, Jim
Kloet, Max S.
Wijngaarden, Sven
Kim, Robbert Q.
Moutsiopoulou, Angeliki
Verdegaal, Marnix
Misra, Mohit
Đikić, Ivan
van der Marel, Gijsbert A.
Overkleeft, Herman S.
Filippov, Dmitri V.
van der Heden van Noort, Gerbrand J.
author_facet Voorneveld, Jim
Kloet, Max S.
Wijngaarden, Sven
Kim, Robbert Q.
Moutsiopoulou, Angeliki
Verdegaal, Marnix
Misra, Mohit
Đikić, Ivan
van der Marel, Gijsbert A.
Overkleeft, Herman S.
Filippov, Dmitri V.
van der Heden van Noort, Gerbrand J.
author_sort Voorneveld, Jim
collection PubMed
description [Image: see text] We describe the development and optimization of a methodology to prepare peptides and proteins modified on the arginine residue with an adenosine-di-phosphate-ribosyl (ADPr) group. Our method comprises reacting an ornithine containing polypeptide on-resin with an α-linked anomeric isothiourea N-riboside, ensuing installment of a phosphomonoester at the 5′-hydroxyl of the ribosyl moiety followed by the conversion into the adenosine diphosphate. We use this method to obtain four regioisomers of ADP-ribosylated ubiquitin (Ub(ADPr)), each modified with an ADP-ribosyl residue on a different arginine position within the ubiquitin (Ub) protein (Arg42, Arg54, Arg72, and Arg74) as the first reported examples of fully synthetic arginine-linked ADPr-modified proteins. We show the chemically prepared Arg-linked Ub(ADPr) to be accepted and processed by Legionella enzymes and compare the entire suite of four Arg-linked Ub(ADPr) regioisomers in a variety of biochemical experiments, allowing us to profile the activity and selectivity of Legionella pneumophila ligase and hydrolase enzymes.
format Online
Article
Text
id pubmed-9673145
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher American Chemical Society
record_format MEDLINE/PubMed
spelling pubmed-96731452022-11-19 Arginine ADP-Ribosylation: Chemical Synthesis of Post-Translationally Modified Ubiquitin Proteins Voorneveld, Jim Kloet, Max S. Wijngaarden, Sven Kim, Robbert Q. Moutsiopoulou, Angeliki Verdegaal, Marnix Misra, Mohit Đikić, Ivan van der Marel, Gijsbert A. Overkleeft, Herman S. Filippov, Dmitri V. van der Heden van Noort, Gerbrand J. J Am Chem Soc [Image: see text] We describe the development and optimization of a methodology to prepare peptides and proteins modified on the arginine residue with an adenosine-di-phosphate-ribosyl (ADPr) group. Our method comprises reacting an ornithine containing polypeptide on-resin with an α-linked anomeric isothiourea N-riboside, ensuing installment of a phosphomonoester at the 5′-hydroxyl of the ribosyl moiety followed by the conversion into the adenosine diphosphate. We use this method to obtain four regioisomers of ADP-ribosylated ubiquitin (Ub(ADPr)), each modified with an ADP-ribosyl residue on a different arginine position within the ubiquitin (Ub) protein (Arg42, Arg54, Arg72, and Arg74) as the first reported examples of fully synthetic arginine-linked ADPr-modified proteins. We show the chemically prepared Arg-linked Ub(ADPr) to be accepted and processed by Legionella enzymes and compare the entire suite of four Arg-linked Ub(ADPr) regioisomers in a variety of biochemical experiments, allowing us to profile the activity and selectivity of Legionella pneumophila ligase and hydrolase enzymes. American Chemical Society 2022-11-01 2022-11-16 /pmc/articles/PMC9673145/ /pubmed/36318515 http://dx.doi.org/10.1021/jacs.2c06249 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Voorneveld, Jim
Kloet, Max S.
Wijngaarden, Sven
Kim, Robbert Q.
Moutsiopoulou, Angeliki
Verdegaal, Marnix
Misra, Mohit
Đikić, Ivan
van der Marel, Gijsbert A.
Overkleeft, Herman S.
Filippov, Dmitri V.
van der Heden van Noort, Gerbrand J.
Arginine ADP-Ribosylation: Chemical Synthesis of Post-Translationally Modified Ubiquitin Proteins
title Arginine ADP-Ribosylation: Chemical Synthesis of Post-Translationally Modified Ubiquitin Proteins
title_full Arginine ADP-Ribosylation: Chemical Synthesis of Post-Translationally Modified Ubiquitin Proteins
title_fullStr Arginine ADP-Ribosylation: Chemical Synthesis of Post-Translationally Modified Ubiquitin Proteins
title_full_unstemmed Arginine ADP-Ribosylation: Chemical Synthesis of Post-Translationally Modified Ubiquitin Proteins
title_short Arginine ADP-Ribosylation: Chemical Synthesis of Post-Translationally Modified Ubiquitin Proteins
title_sort arginine adp-ribosylation: chemical synthesis of post-translationally modified ubiquitin proteins
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9673145/
https://www.ncbi.nlm.nih.gov/pubmed/36318515
http://dx.doi.org/10.1021/jacs.2c06249
work_keys_str_mv AT voorneveldjim arginineadpribosylationchemicalsynthesisofposttranslationallymodifiedubiquitinproteins
AT kloetmaxs arginineadpribosylationchemicalsynthesisofposttranslationallymodifiedubiquitinproteins
AT wijngaardensven arginineadpribosylationchemicalsynthesisofposttranslationallymodifiedubiquitinproteins
AT kimrobbertq arginineadpribosylationchemicalsynthesisofposttranslationallymodifiedubiquitinproteins
AT moutsiopoulouangeliki arginineadpribosylationchemicalsynthesisofposttranslationallymodifiedubiquitinproteins
AT verdegaalmarnix arginineadpribosylationchemicalsynthesisofposttranslationallymodifiedubiquitinproteins
AT misramohit arginineadpribosylationchemicalsynthesisofposttranslationallymodifiedubiquitinproteins
AT đikicivan arginineadpribosylationchemicalsynthesisofposttranslationallymodifiedubiquitinproteins
AT vandermarelgijsberta arginineadpribosylationchemicalsynthesisofposttranslationallymodifiedubiquitinproteins
AT overkleefthermans arginineadpribosylationchemicalsynthesisofposttranslationallymodifiedubiquitinproteins
AT filippovdmitriv arginineadpribosylationchemicalsynthesisofposttranslationallymodifiedubiquitinproteins
AT vanderhedenvannoortgerbrandj arginineadpribosylationchemicalsynthesisofposttranslationallymodifiedubiquitinproteins