Investigating the impact of database choice on the accuracy of metagenomic read classification for the rumen microbiome

Microbiome analysis is quickly moving towards high-throughput methods such as metagenomic sequencing. Accurate taxonomic classification of metagenomic data relies on reference sequence databases, and their associated taxonomy. However, for understudied environments such as the rumen microbiome many...

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Detalles Bibliográficos
Autores principales: Smith, Rebecca H., Glendinning, Laura, Walker, Alan W., Watson, Mick
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9673341/
https://www.ncbi.nlm.nih.gov/pubmed/36401288
http://dx.doi.org/10.1186/s42523-022-00207-7

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9673341/
https://www.ncbi.nlm.nih.gov/pubmed/36401288
http://dx.doi.org/10.1186/s42523-022-00207-7

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