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Pangenomic Genotyping with the Marker Array

We present a new method and software tool called rowbowt that applies a pangenome index to the problem of inferring genotypes from short-read sequencing data. The method uses a novel indexing structure called the marker array. Using the marker array, we can genotype variants with respect from large...

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Detalles Bibliográficos
Autores principales: Mun, Taher, Vaddadi, Naga Sai Kavya, Langmead, Ben
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9674407/
https://www.ncbi.nlm.nih.gov/pubmed/36409181