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Benchmarking taxonomic classifiers with Illumina and Nanopore sequence data for clinical metagenomic diagnostic applications

Culture-independent metagenomic detection of microbial species has the potential to provide rapid and precise real-time diagnostic results. However, it is potentially limited by sequencing and taxonomic classification errors. We use simulated and real-world data to benchmark rates of species misclas...

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Detalles Bibliográficos
Autores principales: Govender, Kumeren N., Eyre, David W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9676057/
https://www.ncbi.nlm.nih.gov/pubmed/36269282
http://dx.doi.org/10.1099/mgen.0.000886