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Device-Controlled Microcondensation for Spatially Confined On-Tissue Digests in MALDI Imaging of N-Glycans

On-tissue enzymatic digestion is a prerequisite for MALDI mass spectrometry imaging (MSI) and spatialomic analysis of tissue proteins and their N-glycan conjugates. Despite the more widely accepted importance of N-glycans as diagnostic and prognostic biomarkers of many diseases and their potential a...

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Autores principales: Fülöp, Annabelle, Marsching, Christian, Barka, Frederik, Ucal, Yasemin, Pfänder, Pauline, Opitz, Christiane A., Barka, Günes, Hopf, Carsten
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9698097/
https://www.ncbi.nlm.nih.gov/pubmed/36355528
http://dx.doi.org/10.3390/ph15111356
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author Fülöp, Annabelle
Marsching, Christian
Barka, Frederik
Ucal, Yasemin
Pfänder, Pauline
Opitz, Christiane A.
Barka, Günes
Hopf, Carsten
author_facet Fülöp, Annabelle
Marsching, Christian
Barka, Frederik
Ucal, Yasemin
Pfänder, Pauline
Opitz, Christiane A.
Barka, Günes
Hopf, Carsten
author_sort Fülöp, Annabelle
collection PubMed
description On-tissue enzymatic digestion is a prerequisite for MALDI mass spectrometry imaging (MSI) and spatialomic analysis of tissue proteins and their N-glycan conjugates. Despite the more widely accepted importance of N-glycans as diagnostic and prognostic biomarkers of many diseases and their potential as pharmacodynamic markers, the crucial sample preparation step, namely on-tissue digestion with enzymes like PNGaseF, is currently mainly carried out by specialized laboratories using home-built incubation arrangements, e.g., petri dishes placed in an incubator. Standardized spatially confined enzyme digests, however, require precise control and possible regulation of humidity and temperature, as high humidity increases the risk of analyte dislocation and low humidity compromises enzyme function. Here, a digestion device that controls humidity by cyclic ventilation and heating of the slide holder and the chamber lid was designed to enable controlled micro-condensation on the slide and to stabilize and monitor the digestion process. The device presented here may help with standardization in MSI. Using sagittal mouse brain sections and xenografted human U87 glioblastoma cells in CD1 nu/nu mouse brain, a device-controlled workflow for MALDI MSI of N-glycans was developed.
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spelling pubmed-96980972022-11-26 Device-Controlled Microcondensation for Spatially Confined On-Tissue Digests in MALDI Imaging of N-Glycans Fülöp, Annabelle Marsching, Christian Barka, Frederik Ucal, Yasemin Pfänder, Pauline Opitz, Christiane A. Barka, Günes Hopf, Carsten Pharmaceuticals (Basel) Communication On-tissue enzymatic digestion is a prerequisite for MALDI mass spectrometry imaging (MSI) and spatialomic analysis of tissue proteins and their N-glycan conjugates. Despite the more widely accepted importance of N-glycans as diagnostic and prognostic biomarkers of many diseases and their potential as pharmacodynamic markers, the crucial sample preparation step, namely on-tissue digestion with enzymes like PNGaseF, is currently mainly carried out by specialized laboratories using home-built incubation arrangements, e.g., petri dishes placed in an incubator. Standardized spatially confined enzyme digests, however, require precise control and possible regulation of humidity and temperature, as high humidity increases the risk of analyte dislocation and low humidity compromises enzyme function. Here, a digestion device that controls humidity by cyclic ventilation and heating of the slide holder and the chamber lid was designed to enable controlled micro-condensation on the slide and to stabilize and monitor the digestion process. The device presented here may help with standardization in MSI. Using sagittal mouse brain sections and xenografted human U87 glioblastoma cells in CD1 nu/nu mouse brain, a device-controlled workflow for MALDI MSI of N-glycans was developed. MDPI 2022-11-03 /pmc/articles/PMC9698097/ /pubmed/36355528 http://dx.doi.org/10.3390/ph15111356 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Fülöp, Annabelle
Marsching, Christian
Barka, Frederik
Ucal, Yasemin
Pfänder, Pauline
Opitz, Christiane A.
Barka, Günes
Hopf, Carsten
Device-Controlled Microcondensation for Spatially Confined On-Tissue Digests in MALDI Imaging of N-Glycans
title Device-Controlled Microcondensation for Spatially Confined On-Tissue Digests in MALDI Imaging of N-Glycans
title_full Device-Controlled Microcondensation for Spatially Confined On-Tissue Digests in MALDI Imaging of N-Glycans
title_fullStr Device-Controlled Microcondensation for Spatially Confined On-Tissue Digests in MALDI Imaging of N-Glycans
title_full_unstemmed Device-Controlled Microcondensation for Spatially Confined On-Tissue Digests in MALDI Imaging of N-Glycans
title_short Device-Controlled Microcondensation for Spatially Confined On-Tissue Digests in MALDI Imaging of N-Glycans
title_sort device-controlled microcondensation for spatially confined on-tissue digests in maldi imaging of n-glycans
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9698097/
https://www.ncbi.nlm.nih.gov/pubmed/36355528
http://dx.doi.org/10.3390/ph15111356
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