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A Single Point Mutation Blocks the Entrance of Ligands to the Cannabinoid CB(2) Receptor via the Lipid Bilayer
[Image: see text] Molecular dynamic (MD) simulations have become a common tool to study the pathway of ligand entry to the orthosteric binding site of G protein-coupled receptors. Here, we have combined MD simulations and site-directed mutagenesis to study the binding process of the potent JWH-133 a...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9709915/ https://www.ncbi.nlm.nih.gov/pubmed/36302505 http://dx.doi.org/10.1021/acs.jcim.2c00865 |
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author | Casajuana-Martin, Nil Navarro, Gemma Gonzalez, Angel Llinas del Torrent, Claudia Gómez-Autet, Marc Quintana García, Aleix Franco, Rafael Pardo, Leonardo |
author_facet | Casajuana-Martin, Nil Navarro, Gemma Gonzalez, Angel Llinas del Torrent, Claudia Gómez-Autet, Marc Quintana García, Aleix Franco, Rafael Pardo, Leonardo |
author_sort | Casajuana-Martin, Nil |
collection | PubMed |
description | [Image: see text] Molecular dynamic (MD) simulations have become a common tool to study the pathway of ligand entry to the orthosteric binding site of G protein-coupled receptors. Here, we have combined MD simulations and site-directed mutagenesis to study the binding process of the potent JWH-133 agonist to the cannabinoid CB(2) receptor (CB(2)R). In CB(2)R, the N-terminus and extracellular loop 2 fold over the ligand binding pocket, blocking access to the binding cavity from the extracellular environment. We, thus, hypothesized that the binding pathway is a multistage process consisting of the hydrophobic ligand diffusing in the lipid bilayer to contact a lipid-facing vestibule, from which the ligand enters an allosteric site inside the transmembrane bundle through a tunnel formed between TMs 1 and 7 and finally moving from the allosteric to the orthosteric binding cavity. This pathway was experimentally validated by the Ala282(7.36)Phe mutation that blocks the entrance of the ligand, as JWH-133 was not able to decrease the forskolin-induced cAMP levels in cells expressing the mutant receptor. This proposed ligand entry pathway defines transient binding sites that are potential cavities for the design of synthetic modulators. |
format | Online Article Text |
id | pubmed-9709915 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-97099152022-12-01 A Single Point Mutation Blocks the Entrance of Ligands to the Cannabinoid CB(2) Receptor via the Lipid Bilayer Casajuana-Martin, Nil Navarro, Gemma Gonzalez, Angel Llinas del Torrent, Claudia Gómez-Autet, Marc Quintana García, Aleix Franco, Rafael Pardo, Leonardo J Chem Inf Model [Image: see text] Molecular dynamic (MD) simulations have become a common tool to study the pathway of ligand entry to the orthosteric binding site of G protein-coupled receptors. Here, we have combined MD simulations and site-directed mutagenesis to study the binding process of the potent JWH-133 agonist to the cannabinoid CB(2) receptor (CB(2)R). In CB(2)R, the N-terminus and extracellular loop 2 fold over the ligand binding pocket, blocking access to the binding cavity from the extracellular environment. We, thus, hypothesized that the binding pathway is a multistage process consisting of the hydrophobic ligand diffusing in the lipid bilayer to contact a lipid-facing vestibule, from which the ligand enters an allosteric site inside the transmembrane bundle through a tunnel formed between TMs 1 and 7 and finally moving from the allosteric to the orthosteric binding cavity. This pathway was experimentally validated by the Ala282(7.36)Phe mutation that blocks the entrance of the ligand, as JWH-133 was not able to decrease the forskolin-induced cAMP levels in cells expressing the mutant receptor. This proposed ligand entry pathway defines transient binding sites that are potential cavities for the design of synthetic modulators. American Chemical Society 2022-10-27 2022-11-28 /pmc/articles/PMC9709915/ /pubmed/36302505 http://dx.doi.org/10.1021/acs.jcim.2c00865 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Casajuana-Martin, Nil Navarro, Gemma Gonzalez, Angel Llinas del Torrent, Claudia Gómez-Autet, Marc Quintana García, Aleix Franco, Rafael Pardo, Leonardo A Single Point Mutation Blocks the Entrance of Ligands to the Cannabinoid CB(2) Receptor via the Lipid Bilayer |
title | A Single Point
Mutation Blocks the Entrance of Ligands
to the Cannabinoid CB(2) Receptor via the Lipid Bilayer |
title_full | A Single Point
Mutation Blocks the Entrance of Ligands
to the Cannabinoid CB(2) Receptor via the Lipid Bilayer |
title_fullStr | A Single Point
Mutation Blocks the Entrance of Ligands
to the Cannabinoid CB(2) Receptor via the Lipid Bilayer |
title_full_unstemmed | A Single Point
Mutation Blocks the Entrance of Ligands
to the Cannabinoid CB(2) Receptor via the Lipid Bilayer |
title_short | A Single Point
Mutation Blocks the Entrance of Ligands
to the Cannabinoid CB(2) Receptor via the Lipid Bilayer |
title_sort | single point
mutation blocks the entrance of ligands
to the cannabinoid cb(2) receptor via the lipid bilayer |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9709915/ https://www.ncbi.nlm.nih.gov/pubmed/36302505 http://dx.doi.org/10.1021/acs.jcim.2c00865 |
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