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kmtricks: efficient and flexible construction of Bloom filters for large sequencing data collections
SUMMARY: When indexing large collections of short-read sequencing data, a common operation that has now been implemented in several tools (Sequence Bloom Trees and variants, BIGSI) is to construct a collection of Bloom filters, one per sample. Each Bloom filter is used to represent a set of k-mers w...
| Autores principales: | , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Oxford University Press
2022
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9710589/ https://www.ncbi.nlm.nih.gov/pubmed/36699393 http://dx.doi.org/10.1093/bioadv/vbac029 |