App-SpaM: phylogenetic placement of short reads without sequence alignment

MOTIVATION: Phylogenetic placement is the task of placing a query sequence of unknown taxonomic origin into a given phylogenetic tree of a set of reference sequences. A major field of application of such methods is, for example, the taxonomic identification of reads in metabarcoding or metagenomic s...

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Detalles Bibliográficos
Autores principales: Blanke, Matthias, Morgenstern, Burkhard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Original Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9710606/
https://www.ncbi.nlm.nih.gov/pubmed/36700102
http://dx.doi.org/10.1093/bioadv/vbab027

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9710606/
https://www.ncbi.nlm.nih.gov/pubmed/36700102
http://dx.doi.org/10.1093/bioadv/vbab027

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