Haplotype assignment of longitudinal viral deep sequencing data using covariation of variant frequencies

Longitudinal deep sequencing of viruses can provide detailed information about intra-host evolutionary dynamics including how viruses interact with and transmit between hosts. Many analyses require haplotype reconstruction, identifying which variants are co-located on the same genomic element. Most...

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Detalles Bibliográficos
Autores principales: Venturini, Cristina, Pang, Juanita, Tamuri, Asif U, Roy, Sunando, Atkinson, Claire, Griffiths, Paul, Breuer, Judith, Goldstein, Richard A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9719071/
https://www.ncbi.nlm.nih.gov/pubmed/36478783
http://dx.doi.org/10.1093/ve/veac093

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9719071/
https://www.ncbi.nlm.nih.gov/pubmed/36478783
http://dx.doi.org/10.1093/ve/veac093

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