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A new family of CRISPR‐type V nucleases with C‐rich PAM recognition
Most CRISPR‐type V nucleases are stimulated to cleave double‐stranded (ds) DNA targets by a T‐rich PAM, which restricts their targeting range. Here, we identify and characterize a new family of type V RNA‐guided nuclease, Cas12l, that exclusively recognizes a C‐rich (5'‐CCY‐3′) PAM. The organiz...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9724661/ https://www.ncbi.nlm.nih.gov/pubmed/36268581 http://dx.doi.org/10.15252/embr.202255481 |
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author | Urbaitis, Tomas Gasiunas, Giedrius Young, Joshua K Hou, Zhenglin Paulraj, Sushmitha Godliauskaite, Egle Juskeviciene, Mantvyda M Stitilyte, Migle Jasnauskaite, Monika Mabuchi, Megumu Robb, G Brett Siksnys, Virginijus |
author_facet | Urbaitis, Tomas Gasiunas, Giedrius Young, Joshua K Hou, Zhenglin Paulraj, Sushmitha Godliauskaite, Egle Juskeviciene, Mantvyda M Stitilyte, Migle Jasnauskaite, Monika Mabuchi, Megumu Robb, G Brett Siksnys, Virginijus |
author_sort | Urbaitis, Tomas |
collection | PubMed |
description | Most CRISPR‐type V nucleases are stimulated to cleave double‐stranded (ds) DNA targets by a T‐rich PAM, which restricts their targeting range. Here, we identify and characterize a new family of type V RNA‐guided nuclease, Cas12l, that exclusively recognizes a C‐rich (5'‐CCY‐3′) PAM. The organization of genes within its CRISPR locus is similar to type II‐B CRISPR‐Cas9 systems, but both sequence analysis and functional studies establish it as a new family of type V effector. Biochemical experiments show that Cas12l nucleases function optimally between 37 and 52°C, depending on the ortholog, and preferentially cut supercoiled DNA. Like other type V nucleases, it exhibits collateral nonspecific ssDNA and ssRNA cleavage activity that is triggered by ssDNA or dsDNA target recognition. Finally, we show that one family member, Asp2Cas12l, functions in a heterologous cellular environment, altogether, suggesting that this new group of CRISPR‐associated nucleases may be harnessed as genome editing reagents. |
format | Online Article Text |
id | pubmed-9724661 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-97246612022-12-08 A new family of CRISPR‐type V nucleases with C‐rich PAM recognition Urbaitis, Tomas Gasiunas, Giedrius Young, Joshua K Hou, Zhenglin Paulraj, Sushmitha Godliauskaite, Egle Juskeviciene, Mantvyda M Stitilyte, Migle Jasnauskaite, Monika Mabuchi, Megumu Robb, G Brett Siksnys, Virginijus EMBO Rep Articles Most CRISPR‐type V nucleases are stimulated to cleave double‐stranded (ds) DNA targets by a T‐rich PAM, which restricts their targeting range. Here, we identify and characterize a new family of type V RNA‐guided nuclease, Cas12l, that exclusively recognizes a C‐rich (5'‐CCY‐3′) PAM. The organization of genes within its CRISPR locus is similar to type II‐B CRISPR‐Cas9 systems, but both sequence analysis and functional studies establish it as a new family of type V effector. Biochemical experiments show that Cas12l nucleases function optimally between 37 and 52°C, depending on the ortholog, and preferentially cut supercoiled DNA. Like other type V nucleases, it exhibits collateral nonspecific ssDNA and ssRNA cleavage activity that is triggered by ssDNA or dsDNA target recognition. Finally, we show that one family member, Asp2Cas12l, functions in a heterologous cellular environment, altogether, suggesting that this new group of CRISPR‐associated nucleases may be harnessed as genome editing reagents. John Wiley and Sons Inc. 2022-10-21 /pmc/articles/PMC9724661/ /pubmed/36268581 http://dx.doi.org/10.15252/embr.202255481 Text en © 2022 The Authors. Published under the terms of the CC BY 4.0 license. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Urbaitis, Tomas Gasiunas, Giedrius Young, Joshua K Hou, Zhenglin Paulraj, Sushmitha Godliauskaite, Egle Juskeviciene, Mantvyda M Stitilyte, Migle Jasnauskaite, Monika Mabuchi, Megumu Robb, G Brett Siksnys, Virginijus A new family of CRISPR‐type V nucleases with C‐rich PAM recognition |
title | A new family of CRISPR‐type V nucleases with C‐rich PAM recognition |
title_full | A new family of CRISPR‐type V nucleases with C‐rich PAM recognition |
title_fullStr | A new family of CRISPR‐type V nucleases with C‐rich PAM recognition |
title_full_unstemmed | A new family of CRISPR‐type V nucleases with C‐rich PAM recognition |
title_short | A new family of CRISPR‐type V nucleases with C‐rich PAM recognition |
title_sort | new family of crispr‐type v nucleases with c‐rich pam recognition |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9724661/ https://www.ncbi.nlm.nih.gov/pubmed/36268581 http://dx.doi.org/10.15252/embr.202255481 |
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