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EndHiC: assemble large contigs into chromosome-level scaffolds using the Hi-C links from contig ends
BACKGROUND: The application of PacBio HiFi and ultra-long ONT reads have enabled huge progress in the contig-level assembly, but it is still challenging to assemble large contigs into chromosomes with available Hi-C scaffolding tools, which count Hi-C links between contigs using the whole or a large...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9730666/ https://www.ncbi.nlm.nih.gov/pubmed/36482318 http://dx.doi.org/10.1186/s12859-022-05087-x |