SYNPHONI: scale-free and phylogeny-aware reconstruction of synteny conservation and transformation across animal genomes

SUMMARY: Current approaches detect conserved genomic order either at chromosomal (macrosynteny) or at subchromosomal scales (microsynteny). The latter generally requires collinearity and hard thresholds on syntenic region size, thus excluding a major proportion of syntenies with recent expansions or...

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Detalles Bibliográficos
Autores principales: Robert, Nicolas Serge Matthieu, Sarigol, Fatih, Zieger, Elisabeth, Simakov, Oleg
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9750109/
https://www.ncbi.nlm.nih.gov/pubmed/36269177
http://dx.doi.org/10.1093/bioinformatics/btac695

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9750109/
https://www.ncbi.nlm.nih.gov/pubmed/36269177
http://dx.doi.org/10.1093/bioinformatics/btac695

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