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k mdiff, large-scale and user-friendly differential k-mer analyses

SUMMARY: Genome wide association studies elucidate links between genotypes and phenotypes. Recent studies point out the interest of conducting such experiments using k-mers as the base signal instead of single-nucleotide polymorphisms. We propose a tool, kmdiff, that performs differential k-mer anal...

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Detalles Bibliográficos
Autores principales: Lemane, Téo, Chikhi, Rayan, Peterlongo, Pierre
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9750116/
https://www.ncbi.nlm.nih.gov/pubmed/36315078
http://dx.doi.org/10.1093/bioinformatics/btac689