Local assembly of long reads enables phylogenomics of transposable elements in a polyploid cell line

Animal cell lines often undergo extreme genome restructuring events, including polyploidy and segmental aneuploidy that can impede de novo whole-genome assembly (WGA). In some species like Drosophila, cell lines also exhibit massive proliferation of transposable elements (TEs). To better understand...

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Detalles Bibliográficos
Autores principales: Han, Shunhua, Dias, Guilherme B, Basting, Preston J, Viswanatha, Raghuvir, Perrimon, Norbert, Bergman, Casey M
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Methods Online
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9757076/
https://www.ncbi.nlm.nih.gov/pubmed/36156149
http://dx.doi.org/10.1093/nar/gkac794

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9757076/
https://www.ncbi.nlm.nih.gov/pubmed/36156149
http://dx.doi.org/10.1093/nar/gkac794

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