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Tumor mutation burden involving epigenetic regulatory genes and the RhoA GTPase predicts overall survival in nodal mature T-cell lymphomas

Nodal mature T-cell lymphomas (nMTCL) comprises a heterogeneous group of rare malignancies with aggressive biological behavior and poor prognosis. Epigenetic phenomena, including mutations in genes that control DNA methylation and histone deacetylation, in addition to inactivating mutations in the R...

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Autores principales: de Pádua Covas Lage, Luís Alberto, Culler, Hebert Fabrício, Barreto, Guilherme Carneiro, Reichert, Cadiele Oliana, Levy, Débora, de Oliveira Costa, Renata, Rocha, Vanderson, Pereira, Juliana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9764541/
https://www.ncbi.nlm.nih.gov/pubmed/36536430
http://dx.doi.org/10.1186/s13148-022-01395-4
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author de Pádua Covas Lage, Luís Alberto
Culler, Hebert Fabrício
Barreto, Guilherme Carneiro
Reichert, Cadiele Oliana
Levy, Débora
de Oliveira Costa, Renata
Rocha, Vanderson
Pereira, Juliana
author_facet de Pádua Covas Lage, Luís Alberto
Culler, Hebert Fabrício
Barreto, Guilherme Carneiro
Reichert, Cadiele Oliana
Levy, Débora
de Oliveira Costa, Renata
Rocha, Vanderson
Pereira, Juliana
author_sort de Pádua Covas Lage, Luís Alberto
collection PubMed
description Nodal mature T-cell lymphomas (nMTCL) comprises a heterogeneous group of rare malignancies with aggressive biological behavior and poor prognosis. Epigenetic phenomena, including mutations in genes that control DNA methylation and histone deacetylation, in addition to inactivating mutations in the RhoA GTPase, play a central role in its pathogenesis and constitute potential new targets for therapeutic intervention. Tumor mutational burden (TMB) reflects the process of clonal evolution, predicts response to anti-cancer therapies and has emerged as a prognostic biomarker in several solid neoplasms; however, its potential prognostic impact remains unknown in nMTCL. In this study, we conducted Sanger sequencing of formalin-fixed paraffin-embedded (FFPE) diagnostic tumor samples using a target-panel to search for recurrent mutations involving the IDH-1/IDH-2, TET-2, DNMT3A and RhoA genes in 59 cases of nMTCL. For the first time, we demonstrated that high-TMB, defined by the presence of ≥ two mutations involving the aforementioned genes, was associated with decreased overall survival in nMTCL patients treated with CHOP-like regimens. Additionally, high-TMB was correlated with bulky disease, lower overall response rate, and higher mortality. Future studies using larger cohorts may validate our preliminary results that indicate TMB as a potential molecular biomarker associated with adverse prognosis in nMTCL.
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spelling pubmed-97645412022-12-21 Tumor mutation burden involving epigenetic regulatory genes and the RhoA GTPase predicts overall survival in nodal mature T-cell lymphomas de Pádua Covas Lage, Luís Alberto Culler, Hebert Fabrício Barreto, Guilherme Carneiro Reichert, Cadiele Oliana Levy, Débora de Oliveira Costa, Renata Rocha, Vanderson Pereira, Juliana Clin Epigenetics Brief Report Nodal mature T-cell lymphomas (nMTCL) comprises a heterogeneous group of rare malignancies with aggressive biological behavior and poor prognosis. Epigenetic phenomena, including mutations in genes that control DNA methylation and histone deacetylation, in addition to inactivating mutations in the RhoA GTPase, play a central role in its pathogenesis and constitute potential new targets for therapeutic intervention. Tumor mutational burden (TMB) reflects the process of clonal evolution, predicts response to anti-cancer therapies and has emerged as a prognostic biomarker in several solid neoplasms; however, its potential prognostic impact remains unknown in nMTCL. In this study, we conducted Sanger sequencing of formalin-fixed paraffin-embedded (FFPE) diagnostic tumor samples using a target-panel to search for recurrent mutations involving the IDH-1/IDH-2, TET-2, DNMT3A and RhoA genes in 59 cases of nMTCL. For the first time, we demonstrated that high-TMB, defined by the presence of ≥ two mutations involving the aforementioned genes, was associated with decreased overall survival in nMTCL patients treated with CHOP-like regimens. Additionally, high-TMB was correlated with bulky disease, lower overall response rate, and higher mortality. Future studies using larger cohorts may validate our preliminary results that indicate TMB as a potential molecular biomarker associated with adverse prognosis in nMTCL. BioMed Central 2022-12-19 /pmc/articles/PMC9764541/ /pubmed/36536430 http://dx.doi.org/10.1186/s13148-022-01395-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Brief Report
de Pádua Covas Lage, Luís Alberto
Culler, Hebert Fabrício
Barreto, Guilherme Carneiro
Reichert, Cadiele Oliana
Levy, Débora
de Oliveira Costa, Renata
Rocha, Vanderson
Pereira, Juliana
Tumor mutation burden involving epigenetic regulatory genes and the RhoA GTPase predicts overall survival in nodal mature T-cell lymphomas
title Tumor mutation burden involving epigenetic regulatory genes and the RhoA GTPase predicts overall survival in nodal mature T-cell lymphomas
title_full Tumor mutation burden involving epigenetic regulatory genes and the RhoA GTPase predicts overall survival in nodal mature T-cell lymphomas
title_fullStr Tumor mutation burden involving epigenetic regulatory genes and the RhoA GTPase predicts overall survival in nodal mature T-cell lymphomas
title_full_unstemmed Tumor mutation burden involving epigenetic regulatory genes and the RhoA GTPase predicts overall survival in nodal mature T-cell lymphomas
title_short Tumor mutation burden involving epigenetic regulatory genes and the RhoA GTPase predicts overall survival in nodal mature T-cell lymphomas
title_sort tumor mutation burden involving epigenetic regulatory genes and the rhoa gtpase predicts overall survival in nodal mature t-cell lymphomas
topic Brief Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9764541/
https://www.ncbi.nlm.nih.gov/pubmed/36536430
http://dx.doi.org/10.1186/s13148-022-01395-4
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