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Activation Mechanism of RhoA Caused by Constitutively Activating Mutations G14V and Q63L

RhoA, a member of Rho GTPases, regulates myriad cellular processes. Abnormal expression of RhoA has been implicated in various diseases, including cancers, developmental disorders and bacterial infections. RhoA mutations G14V and Q63L have been reported to constitutively activate RhoA. To figure out...

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Autores principales: Chen, Shiyao, Zhang, Zirui, Zhang, Yijing, Choi, Taeyoung, Zhao, Yaxue
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9778661/
https://www.ncbi.nlm.nih.gov/pubmed/36555100
http://dx.doi.org/10.3390/ijms232415458
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author Chen, Shiyao
Zhang, Zirui
Zhang, Yijing
Choi, Taeyoung
Zhao, Yaxue
author_facet Chen, Shiyao
Zhang, Zirui
Zhang, Yijing
Choi, Taeyoung
Zhao, Yaxue
author_sort Chen, Shiyao
collection PubMed
description RhoA, a member of Rho GTPases, regulates myriad cellular processes. Abnormal expression of RhoA has been implicated in various diseases, including cancers, developmental disorders and bacterial infections. RhoA mutations G14V and Q63L have been reported to constitutively activate RhoA. To figure out the mechanisms, in total, 1.8 μs molecular dynamics (MD) simulations were performed here on RhoA(WT) and mutants G14V and Q63L in GTP-bound forms, followed by dynamic analysis. Both mutations were found to affect the conformational dynamics of RhoA switch regions, especially switch I, shifting the whole ensemble from the wild type’s open inactive state to different active-like states, where T37 and Mg(2+) played important roles. In RhoA(G14V), both switches underwent thorough state transition, whereas in RhoA(Q63L), only switch I was sustained in a much more closed conformation with additional hydrophobic interactions introduced by L63. Moreover, significantly decreased solvent exposure of the GTP-binding site was observed in both mutants with the surrounding hydrophobic regions expanded, which furnished access to water molecules required for hydrolysis more difficult and thereby impaired GTP hydrolysis. These structural and dynamic differences first suggested the potential activation mechanism of RhoA(G14V) and RhoA(Q63L). Together, our findings complemented the understanding of RhoA activation at the atomic level and can be utilized in the development of novel therapies for RhoA-related diseases.
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spelling pubmed-97786612022-12-23 Activation Mechanism of RhoA Caused by Constitutively Activating Mutations G14V and Q63L Chen, Shiyao Zhang, Zirui Zhang, Yijing Choi, Taeyoung Zhao, Yaxue Int J Mol Sci Article RhoA, a member of Rho GTPases, regulates myriad cellular processes. Abnormal expression of RhoA has been implicated in various diseases, including cancers, developmental disorders and bacterial infections. RhoA mutations G14V and Q63L have been reported to constitutively activate RhoA. To figure out the mechanisms, in total, 1.8 μs molecular dynamics (MD) simulations were performed here on RhoA(WT) and mutants G14V and Q63L in GTP-bound forms, followed by dynamic analysis. Both mutations were found to affect the conformational dynamics of RhoA switch regions, especially switch I, shifting the whole ensemble from the wild type’s open inactive state to different active-like states, where T37 and Mg(2+) played important roles. In RhoA(G14V), both switches underwent thorough state transition, whereas in RhoA(Q63L), only switch I was sustained in a much more closed conformation with additional hydrophobic interactions introduced by L63. Moreover, significantly decreased solvent exposure of the GTP-binding site was observed in both mutants with the surrounding hydrophobic regions expanded, which furnished access to water molecules required for hydrolysis more difficult and thereby impaired GTP hydrolysis. These structural and dynamic differences first suggested the potential activation mechanism of RhoA(G14V) and RhoA(Q63L). Together, our findings complemented the understanding of RhoA activation at the atomic level and can be utilized in the development of novel therapies for RhoA-related diseases. MDPI 2022-12-07 /pmc/articles/PMC9778661/ /pubmed/36555100 http://dx.doi.org/10.3390/ijms232415458 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Chen, Shiyao
Zhang, Zirui
Zhang, Yijing
Choi, Taeyoung
Zhao, Yaxue
Activation Mechanism of RhoA Caused by Constitutively Activating Mutations G14V and Q63L
title Activation Mechanism of RhoA Caused by Constitutively Activating Mutations G14V and Q63L
title_full Activation Mechanism of RhoA Caused by Constitutively Activating Mutations G14V and Q63L
title_fullStr Activation Mechanism of RhoA Caused by Constitutively Activating Mutations G14V and Q63L
title_full_unstemmed Activation Mechanism of RhoA Caused by Constitutively Activating Mutations G14V and Q63L
title_short Activation Mechanism of RhoA Caused by Constitutively Activating Mutations G14V and Q63L
title_sort activation mechanism of rhoa caused by constitutively activating mutations g14v and q63l
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9778661/
https://www.ncbi.nlm.nih.gov/pubmed/36555100
http://dx.doi.org/10.3390/ijms232415458
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