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A method to build extended sequence context models of point mutations and indels

The mutation rate of a specific position in the human genome depends on the sequence context surrounding it. Modeling the mutation rate by estimating a rate for each possible k-mer, however, only works for small values of k since the data becomes too sparse for larger values of k. Here we propose a...

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Detalles Bibliográficos
Autores principales: Bethune, Jörn, Kleppe, April, Besenbacher, Søren
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9780256/
https://www.ncbi.nlm.nih.gov/pubmed/36550134
http://dx.doi.org/10.1038/s41467-022-35596-5