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Single-cell multi-omics integration for unpaired data by a siamese network with graph-based contrastive loss

BACKGROUND: Single-cell omics technology is rapidly developing to measure the epigenome, genome, and transcriptome across a range of cell types. However, it is still challenging to integrate omics data from different modalities. Here, we propose a variation of the Siamese neural network framework ca...

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Detalles Bibliográficos
Autores principales: Liu, Chaozhong, Wang, Linhua, Liu, Zhandong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9812356/
https://www.ncbi.nlm.nih.gov/pubmed/36600199
http://dx.doi.org/10.1186/s12859-022-05126-7