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Enzymatic kinetic resolution of desmethylphosphinothricin indicates that phosphinic group is a bioisostere of carboxyl group

Escherichia coli glutamate decarboxylase (EcGadB), a pyridoxal 5’-phosphate (PLP)-dependent enzyme, is highly specific for L-glutamate and was demonstrated to be effectively immobilised for the production of γ-aminobutyric acid (GABA), its decarboxylation product. Herein we show that EcGadB quantita...

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Autores principales: De Biase, Daniela, Cappadocio, Francesca, Pennacchietti, Eugenia, Giovannercole, Fabio, Coluccia, Antonio, Vepsäläinen, Jouko, Khomutov, Alex
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9814759/
https://www.ncbi.nlm.nih.gov/pubmed/36703359
http://dx.doi.org/10.1038/s42004-020-00368-z
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author De Biase, Daniela
Cappadocio, Francesca
Pennacchietti, Eugenia
Giovannercole, Fabio
Coluccia, Antonio
Vepsäläinen, Jouko
Khomutov, Alex
author_facet De Biase, Daniela
Cappadocio, Francesca
Pennacchietti, Eugenia
Giovannercole, Fabio
Coluccia, Antonio
Vepsäläinen, Jouko
Khomutov, Alex
author_sort De Biase, Daniela
collection PubMed
description Escherichia coli glutamate decarboxylase (EcGadB), a pyridoxal 5’-phosphate (PLP)-dependent enzyme, is highly specific for L-glutamate and was demonstrated to be effectively immobilised for the production of γ-aminobutyric acid (GABA), its decarboxylation product. Herein we show that EcGadB quantitatively decarboxylates the L-isomer of D,L-2-amino-4-(hydroxyphosphinyl)butyric acid (D,L-Glu-γ-P(H)), a phosphinic analogue of glutamate containing C-P-H bonds. This yields 3-aminopropylphosphinic acid (GABA-P(H)), a known GABA(B) receptor agonist and provides previously unknown D-Glu-γ-P(H), allowing us to demonstrate that L-Glu-γ-P(H), but not D-Glu-γ-P(H), is responsible for D,L-Glu-γ-P(H) antibacterial activity. Furthermore, using GABase, a preparation of GABA-transaminase and succinic semialdehyde dehydrogenase, we show that GABA-P(H) is converted to 3-(hydroxyphosphinyl)propionic acid (Succinate-P(H)). Hence, PLP-dependent and NADP(+)-dependent enzymes are herein shown to recognise and metabolise phosphinic compounds, leaving unaffected the P-H bond. We therefore suggest that the phosphinic group is a bioisostere of the carboxyl group and the metabolic transformations of phosphinic compounds may offer a ground for prodrug design.
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spelling pubmed-98147592023-01-10 Enzymatic kinetic resolution of desmethylphosphinothricin indicates that phosphinic group is a bioisostere of carboxyl group De Biase, Daniela Cappadocio, Francesca Pennacchietti, Eugenia Giovannercole, Fabio Coluccia, Antonio Vepsäläinen, Jouko Khomutov, Alex Commun Chem Article Escherichia coli glutamate decarboxylase (EcGadB), a pyridoxal 5’-phosphate (PLP)-dependent enzyme, is highly specific for L-glutamate and was demonstrated to be effectively immobilised for the production of γ-aminobutyric acid (GABA), its decarboxylation product. Herein we show that EcGadB quantitatively decarboxylates the L-isomer of D,L-2-amino-4-(hydroxyphosphinyl)butyric acid (D,L-Glu-γ-P(H)), a phosphinic analogue of glutamate containing C-P-H bonds. This yields 3-aminopropylphosphinic acid (GABA-P(H)), a known GABA(B) receptor agonist and provides previously unknown D-Glu-γ-P(H), allowing us to demonstrate that L-Glu-γ-P(H), but not D-Glu-γ-P(H), is responsible for D,L-Glu-γ-P(H) antibacterial activity. Furthermore, using GABase, a preparation of GABA-transaminase and succinic semialdehyde dehydrogenase, we show that GABA-P(H) is converted to 3-(hydroxyphosphinyl)propionic acid (Succinate-P(H)). Hence, PLP-dependent and NADP(+)-dependent enzymes are herein shown to recognise and metabolise phosphinic compounds, leaving unaffected the P-H bond. We therefore suggest that the phosphinic group is a bioisostere of the carboxyl group and the metabolic transformations of phosphinic compounds may offer a ground for prodrug design. Nature Publishing Group UK 2020-09-02 /pmc/articles/PMC9814759/ /pubmed/36703359 http://dx.doi.org/10.1038/s42004-020-00368-z Text en © The Author(s) 2020 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
De Biase, Daniela
Cappadocio, Francesca
Pennacchietti, Eugenia
Giovannercole, Fabio
Coluccia, Antonio
Vepsäläinen, Jouko
Khomutov, Alex
Enzymatic kinetic resolution of desmethylphosphinothricin indicates that phosphinic group is a bioisostere of carboxyl group
title Enzymatic kinetic resolution of desmethylphosphinothricin indicates that phosphinic group is a bioisostere of carboxyl group
title_full Enzymatic kinetic resolution of desmethylphosphinothricin indicates that phosphinic group is a bioisostere of carboxyl group
title_fullStr Enzymatic kinetic resolution of desmethylphosphinothricin indicates that phosphinic group is a bioisostere of carboxyl group
title_full_unstemmed Enzymatic kinetic resolution of desmethylphosphinothricin indicates that phosphinic group is a bioisostere of carboxyl group
title_short Enzymatic kinetic resolution of desmethylphosphinothricin indicates that phosphinic group is a bioisostere of carboxyl group
title_sort enzymatic kinetic resolution of desmethylphosphinothricin indicates that phosphinic group is a bioisostere of carboxyl group
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9814759/
https://www.ncbi.nlm.nih.gov/pubmed/36703359
http://dx.doi.org/10.1038/s42004-020-00368-z
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