Cargando…
Development of Non-Targeted Mass Spectrometry Method for Distinguishing Spelt and Wheat
Food fraud, even when not in the news, is ubiquitous and demands the development of innovative strategies to combat it. A new non-targeted method (NTM) for distinguishing spelt and wheat is described, which aids in food fraud detection and authenticity testing. A highly resolved fingerprint in the f...
Autores principales: | , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9818861/ https://www.ncbi.nlm.nih.gov/pubmed/36613357 http://dx.doi.org/10.3390/foods12010141 |
_version_ | 1784865089724088320 |
---|---|
author | Nichani, Kapil Uhlig, Steffen Colson, Bertrand Hettwer, Karina Simon, Kirsten Bönick, Josephine Uhlig, Carsten Kemmlein, Sabine Stoyke, Manfred Gowik, Petra Huschek, Gerd Rawel, Harshadrai M. |
author_facet | Nichani, Kapil Uhlig, Steffen Colson, Bertrand Hettwer, Karina Simon, Kirsten Bönick, Josephine Uhlig, Carsten Kemmlein, Sabine Stoyke, Manfred Gowik, Petra Huschek, Gerd Rawel, Harshadrai M. |
author_sort | Nichani, Kapil |
collection | PubMed |
description | Food fraud, even when not in the news, is ubiquitous and demands the development of innovative strategies to combat it. A new non-targeted method (NTM) for distinguishing spelt and wheat is described, which aids in food fraud detection and authenticity testing. A highly resolved fingerprint in the form of spectra is obtained for several cultivars of spelt and wheat using liquid chromatography coupled high-resolution mass spectrometry (LC-HRMS). Convolutional neural network (CNN) models are built using a nested cross validation (NCV) approach by appropriately training them using a calibration set comprising duplicate measurements of eleven cultivars of wheat and spelt, each. The results reveal that the CNNs automatically learn patterns and representations to best discriminate tested samples into spelt or wheat. This is further investigated using an external validation set comprising artificially mixed spectra, samples for processed goods (spelt bread and flour), eleven untypical spelt, and six old wheat cultivars. These cultivars were not part of model building. We introduce a metric called the D score to quantitatively evaluate and compare the classification decisions. Our results demonstrate that NTMs based on NCV and CNNs trained using appropriately chosen spectral data can be reliable enough to be used on a wider range of cultivars and their mixes. |
format | Online Article Text |
id | pubmed-9818861 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-98188612023-01-07 Development of Non-Targeted Mass Spectrometry Method for Distinguishing Spelt and Wheat Nichani, Kapil Uhlig, Steffen Colson, Bertrand Hettwer, Karina Simon, Kirsten Bönick, Josephine Uhlig, Carsten Kemmlein, Sabine Stoyke, Manfred Gowik, Petra Huschek, Gerd Rawel, Harshadrai M. Foods Communication Food fraud, even when not in the news, is ubiquitous and demands the development of innovative strategies to combat it. A new non-targeted method (NTM) for distinguishing spelt and wheat is described, which aids in food fraud detection and authenticity testing. A highly resolved fingerprint in the form of spectra is obtained for several cultivars of spelt and wheat using liquid chromatography coupled high-resolution mass spectrometry (LC-HRMS). Convolutional neural network (CNN) models are built using a nested cross validation (NCV) approach by appropriately training them using a calibration set comprising duplicate measurements of eleven cultivars of wheat and spelt, each. The results reveal that the CNNs automatically learn patterns and representations to best discriminate tested samples into spelt or wheat. This is further investigated using an external validation set comprising artificially mixed spectra, samples for processed goods (spelt bread and flour), eleven untypical spelt, and six old wheat cultivars. These cultivars were not part of model building. We introduce a metric called the D score to quantitatively evaluate and compare the classification decisions. Our results demonstrate that NTMs based on NCV and CNNs trained using appropriately chosen spectral data can be reliable enough to be used on a wider range of cultivars and their mixes. MDPI 2022-12-27 /pmc/articles/PMC9818861/ /pubmed/36613357 http://dx.doi.org/10.3390/foods12010141 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Communication Nichani, Kapil Uhlig, Steffen Colson, Bertrand Hettwer, Karina Simon, Kirsten Bönick, Josephine Uhlig, Carsten Kemmlein, Sabine Stoyke, Manfred Gowik, Petra Huschek, Gerd Rawel, Harshadrai M. Development of Non-Targeted Mass Spectrometry Method for Distinguishing Spelt and Wheat |
title | Development of Non-Targeted Mass Spectrometry Method for Distinguishing Spelt and Wheat |
title_full | Development of Non-Targeted Mass Spectrometry Method for Distinguishing Spelt and Wheat |
title_fullStr | Development of Non-Targeted Mass Spectrometry Method for Distinguishing Spelt and Wheat |
title_full_unstemmed | Development of Non-Targeted Mass Spectrometry Method for Distinguishing Spelt and Wheat |
title_short | Development of Non-Targeted Mass Spectrometry Method for Distinguishing Spelt and Wheat |
title_sort | development of non-targeted mass spectrometry method for distinguishing spelt and wheat |
topic | Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9818861/ https://www.ncbi.nlm.nih.gov/pubmed/36613357 http://dx.doi.org/10.3390/foods12010141 |
work_keys_str_mv | AT nichanikapil developmentofnontargetedmassspectrometrymethodfordistinguishingspeltandwheat AT uhligsteffen developmentofnontargetedmassspectrometrymethodfordistinguishingspeltandwheat AT colsonbertrand developmentofnontargetedmassspectrometrymethodfordistinguishingspeltandwheat AT hettwerkarina developmentofnontargetedmassspectrometrymethodfordistinguishingspeltandwheat AT simonkirsten developmentofnontargetedmassspectrometrymethodfordistinguishingspeltandwheat AT bonickjosephine developmentofnontargetedmassspectrometrymethodfordistinguishingspeltandwheat AT uhligcarsten developmentofnontargetedmassspectrometrymethodfordistinguishingspeltandwheat AT kemmleinsabine developmentofnontargetedmassspectrometrymethodfordistinguishingspeltandwheat AT stoykemanfred developmentofnontargetedmassspectrometrymethodfordistinguishingspeltandwheat AT gowikpetra developmentofnontargetedmassspectrometrymethodfordistinguishingspeltandwheat AT huschekgerd developmentofnontargetedmassspectrometrymethodfordistinguishingspeltandwheat AT rawelharshadraim developmentofnontargetedmassspectrometrymethodfordistinguishingspeltandwheat |