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Benchmarking commonly used software suites and analysis workflows for DIA proteomics and phosphoproteomics

A plethora of software suites and multiple classes of spectral libraries have been developed to enhance the depth and robustness of data-independent acquisition (DIA) data processing. However, how the combination of a DIA software tool and a spectral library impacts the outcome of DIA proteomics and...

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Detalles Bibliográficos
Autores principales: Lou, Ronghui, Cao, Ye, Li, Shanshan, Lang, Xiaoyu, Li, Yunxia, Zhang, Yaoyang, Shui, Wenqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9822986/
https://www.ncbi.nlm.nih.gov/pubmed/36609502
http://dx.doi.org/10.1038/s41467-022-35740-1