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Sibling variation in polygenic traits and DNA recombination mapping with UK Biobank and IVF family data

We use UK Biobank and a unique IVF family dataset (including genotyped embryos) to investigate sibling variation in both phenotype and genotype. We compare phenotype (disease status, height, blood biomarkers) and genotype (polygenic scores, polygenic health index) distributions among siblings to tho...

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Autores principales: Lello, Louis, Hsu, Maximus, Widen, Erik, Raben, Timothy G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825593/
https://www.ncbi.nlm.nih.gov/pubmed/36611071
http://dx.doi.org/10.1038/s41598-023-27561-z
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author Lello, Louis
Hsu, Maximus
Widen, Erik
Raben, Timothy G.
author_facet Lello, Louis
Hsu, Maximus
Widen, Erik
Raben, Timothy G.
author_sort Lello, Louis
collection PubMed
description We use UK Biobank and a unique IVF family dataset (including genotyped embryos) to investigate sibling variation in both phenotype and genotype. We compare phenotype (disease status, height, blood biomarkers) and genotype (polygenic scores, polygenic health index) distributions among siblings to those in the general population. As expected, the between-siblings standard deviation in polygenic scores is [Formula: see text] times smaller than in the general population, but variation is still significant. As previously demonstrated, this allows for substantial benefit from polygenic screening in IVF. Differences in sibling genotypes result from distinct recombination patterns in sexual reproduction. We develop a novel sibling-pair method for detection of recombination breaks via statistical discontinuities. The new method is used to construct a dataset of 1.44 million recombination events which may be useful in further study of meiosis.
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spelling pubmed-98255932023-01-09 Sibling variation in polygenic traits and DNA recombination mapping with UK Biobank and IVF family data Lello, Louis Hsu, Maximus Widen, Erik Raben, Timothy G. Sci Rep Article We use UK Biobank and a unique IVF family dataset (including genotyped embryos) to investigate sibling variation in both phenotype and genotype. We compare phenotype (disease status, height, blood biomarkers) and genotype (polygenic scores, polygenic health index) distributions among siblings to those in the general population. As expected, the between-siblings standard deviation in polygenic scores is [Formula: see text] times smaller than in the general population, but variation is still significant. As previously demonstrated, this allows for substantial benefit from polygenic screening in IVF. Differences in sibling genotypes result from distinct recombination patterns in sexual reproduction. We develop a novel sibling-pair method for detection of recombination breaks via statistical discontinuities. The new method is used to construct a dataset of 1.44 million recombination events which may be useful in further study of meiosis. Nature Publishing Group UK 2023-01-07 /pmc/articles/PMC9825593/ /pubmed/36611071 http://dx.doi.org/10.1038/s41598-023-27561-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Lello, Louis
Hsu, Maximus
Widen, Erik
Raben, Timothy G.
Sibling variation in polygenic traits and DNA recombination mapping with UK Biobank and IVF family data
title Sibling variation in polygenic traits and DNA recombination mapping with UK Biobank and IVF family data
title_full Sibling variation in polygenic traits and DNA recombination mapping with UK Biobank and IVF family data
title_fullStr Sibling variation in polygenic traits and DNA recombination mapping with UK Biobank and IVF family data
title_full_unstemmed Sibling variation in polygenic traits and DNA recombination mapping with UK Biobank and IVF family data
title_short Sibling variation in polygenic traits and DNA recombination mapping with UK Biobank and IVF family data
title_sort sibling variation in polygenic traits and dna recombination mapping with uk biobank and ivf family data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825593/
https://www.ncbi.nlm.nih.gov/pubmed/36611071
http://dx.doi.org/10.1038/s41598-023-27561-z
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