htseq-clip: a toolset for the preprocessing of eCLIP/iCLIP datasets

SUMMARY: Transcriptome-wide detection of binding sites of RNA-binding proteins is achieved using Individual-nucleotide crosslinking and immunoprecipitation (iCLIP) and its derivative enhanced CLIP (eCLIP) sequencing methods. Here, we introduce htseq-clip, a python package developed for preprocessing...

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Detalles Bibliográficos
Autores principales: Sahadevan, Sudeep, Sekaran, Thileepan, Ashaf, Nadia, Fritz, Marko, Hentze, Matthias W, Huber, Wolfgang, Schwarzl, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825771/
https://www.ncbi.nlm.nih.gov/pubmed/36394253
http://dx.doi.org/10.1093/bioinformatics/btac747

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825771/
https://www.ncbi.nlm.nih.gov/pubmed/36394253
http://dx.doi.org/10.1093/bioinformatics/btac747

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