Efficient computation of contributional diversity metrics from microbiome data with FuncDiv

MOTIVATION: Microbiome datasets with taxa linked to the functions (e.g. genes) they encode are becoming more common as metagenomics sequencing approaches improve. However, these data are challenging to analyze due to their complexity. Summary metrics, such as the alpha and beta diversity of taxa con...

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Detalles Bibliográficos
Autores principales: Douglas, Gavin M, Kim, Sunu, Langille, Morgan G I, Shapiro, B Jesse
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825779/
https://www.ncbi.nlm.nih.gov/pubmed/36519836
http://dx.doi.org/10.1093/bioinformatics/btac809

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9825779/
https://www.ncbi.nlm.nih.gov/pubmed/36519836
http://dx.doi.org/10.1093/bioinformatics/btac809

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