KMCP: accurate metagenomic profiling of both prokaryotic and viral populations by pseudo-mapping

MOTIVATION: The growing number of microbial reference genomes enables the improvement of metagenomic profiling accuracy but also imposes greater requirements on the indexing efficiency, database size and runtime of taxonomic profilers. Additionally, most profilers focus mainly on bacterial, archaeal...

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Detalles Bibliográficos
Autores principales: Shen, Wei, Xiang, Hongyan, Huang, Tianquan, Tang, Hui, Peng, Mingli, Cai, Dachuan, Hu, Peng, Ren, Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Original Paper
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9828150/
https://www.ncbi.nlm.nih.gov/pubmed/36579886
http://dx.doi.org/10.1093/bioinformatics/btac845

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9828150/
https://www.ncbi.nlm.nih.gov/pubmed/36579886
http://dx.doi.org/10.1093/bioinformatics/btac845

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