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Growth promotion effect of red ginseng dietary fiber to probiotics and transcriptome analysis of Lactiplantibacillusplantarum
BACKGROUND: Red ginseng marc, the residue of red ginseng left after water extraction, is rich in dietary fiber. Dietary fiber derived from fruits or vegetables can promote the proliferation of probiotics, and it is a key technology in the food industry to increase the productivity of probiotics by a...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9834016/ https://www.ncbi.nlm.nih.gov/pubmed/36644380 http://dx.doi.org/10.1016/j.jgr.2022.09.003 |
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author | Yu, Hye-Young Rhim, Dong-Bin Kim, Sang-Kyu Ban, O-Hyun Oh, Sang-Ki Seo, Jiho Hong, Soon-Ki |
author_facet | Yu, Hye-Young Rhim, Dong-Bin Kim, Sang-Kyu Ban, O-Hyun Oh, Sang-Ki Seo, Jiho Hong, Soon-Ki |
author_sort | Yu, Hye-Young |
collection | PubMed |
description | BACKGROUND: Red ginseng marc, the residue of red ginseng left after water extraction, is rich in dietary fiber. Dietary fiber derived from fruits or vegetables can promote the proliferation of probiotics, and it is a key technology in the food industry to increase the productivity of probiotics by adding growth-enhancing substances such as dietary fiber. In this study, the effect of red ginseng dietary fiber (RGDF) on the growth of probiotic bacterial strains was investigated at the phenotypic and genetic levels. METHODS: We performed transcriptome profiling of Lactiplantibacillus plantarum IDCC3501 in two phases of culture (logarithmic (L)-phase and stationary (S)-phase) in two culture conditions (with or without RGDF) using RNA-seq. Differentially expressed genes (DEGs) were identified and classified according to Gene Ontology terms. RESULTS: The growth of L.plantarum IDCC3501 was enhanced in medium supplemented with RGDF up to 2%. As a result of DEG analysis, 29 genes were upregulated and 30 were downregulated in the RGDF-treated group in the L-phase. In the S-phase, 57 genes were upregulated and 126 were downregulated in the RGDF-treated group. Among the upregulated genes, 5 were upregulated only in the L-phase, 10 were upregulated only in the S-phase, and 3 were upregulated in both the L- and S-phases. CONCLUSIONS: Transcriptome analysis could be a valuable tool for elucidating the molecular mechanisms by which RGDF promotes the proliferation of L.plantarum IDCC3501. This growth-promoting effect of RGDF is important, since RGDF could be used as a prebiotic source without additional chemical or enzymatic processing. |
format | Online Article Text |
id | pubmed-9834016 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-98340162023-01-13 Growth promotion effect of red ginseng dietary fiber to probiotics and transcriptome analysis of Lactiplantibacillusplantarum Yu, Hye-Young Rhim, Dong-Bin Kim, Sang-Kyu Ban, O-Hyun Oh, Sang-Ki Seo, Jiho Hong, Soon-Ki J Ginseng Res Research Article BACKGROUND: Red ginseng marc, the residue of red ginseng left after water extraction, is rich in dietary fiber. Dietary fiber derived from fruits or vegetables can promote the proliferation of probiotics, and it is a key technology in the food industry to increase the productivity of probiotics by adding growth-enhancing substances such as dietary fiber. In this study, the effect of red ginseng dietary fiber (RGDF) on the growth of probiotic bacterial strains was investigated at the phenotypic and genetic levels. METHODS: We performed transcriptome profiling of Lactiplantibacillus plantarum IDCC3501 in two phases of culture (logarithmic (L)-phase and stationary (S)-phase) in two culture conditions (with or without RGDF) using RNA-seq. Differentially expressed genes (DEGs) were identified and classified according to Gene Ontology terms. RESULTS: The growth of L.plantarum IDCC3501 was enhanced in medium supplemented with RGDF up to 2%. As a result of DEG analysis, 29 genes were upregulated and 30 were downregulated in the RGDF-treated group in the L-phase. In the S-phase, 57 genes were upregulated and 126 were downregulated in the RGDF-treated group. Among the upregulated genes, 5 were upregulated only in the L-phase, 10 were upregulated only in the S-phase, and 3 were upregulated in both the L- and S-phases. CONCLUSIONS: Transcriptome analysis could be a valuable tool for elucidating the molecular mechanisms by which RGDF promotes the proliferation of L.plantarum IDCC3501. This growth-promoting effect of RGDF is important, since RGDF could be used as a prebiotic source without additional chemical or enzymatic processing. Elsevier 2023-01 2022-10-03 /pmc/articles/PMC9834016/ /pubmed/36644380 http://dx.doi.org/10.1016/j.jgr.2022.09.003 Text en © 2022 The Korean Society of Ginseng. Publishing services by Elsevier B.V. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Yu, Hye-Young Rhim, Dong-Bin Kim, Sang-Kyu Ban, O-Hyun Oh, Sang-Ki Seo, Jiho Hong, Soon-Ki Growth promotion effect of red ginseng dietary fiber to probiotics and transcriptome analysis of Lactiplantibacillusplantarum |
title | Growth promotion effect of red ginseng dietary fiber to probiotics and transcriptome analysis of Lactiplantibacillusplantarum |
title_full | Growth promotion effect of red ginseng dietary fiber to probiotics and transcriptome analysis of Lactiplantibacillusplantarum |
title_fullStr | Growth promotion effect of red ginseng dietary fiber to probiotics and transcriptome analysis of Lactiplantibacillusplantarum |
title_full_unstemmed | Growth promotion effect of red ginseng dietary fiber to probiotics and transcriptome analysis of Lactiplantibacillusplantarum |
title_short | Growth promotion effect of red ginseng dietary fiber to probiotics and transcriptome analysis of Lactiplantibacillusplantarum |
title_sort | growth promotion effect of red ginseng dietary fiber to probiotics and transcriptome analysis of lactiplantibacillusplantarum |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9834016/ https://www.ncbi.nlm.nih.gov/pubmed/36644380 http://dx.doi.org/10.1016/j.jgr.2022.09.003 |
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